RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 VWCEQ96DN2 955 aa21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 NLRP4Q96MN2 994 aa21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 OSMRQ99650 979 aa21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 REEP2Q9BRK0 252 aa21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 FDXACB1Q9BRP7 624 aaPredicted RBP21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 GCOM2Q9BZD3 368 aaPredicted RBP21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 INO80BQ9C086 356 aaPredicted RBP21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 IFT122Q9HBG6 1241 aa21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 IL23AQ9NPF7 189 aa21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 SCN5AQ14524 2016 aa21.45■■□□□ 1.02
PCOLCE-208ENST00000487172 NPHP3-ACAD11A0A0J9YXS1 232 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 KRT18P05783 430 aaKnown RBP21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 SRGAP2CP0DJJ0 459 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 DARSP14868 501 aaKnown RBP21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 NAMPTP43490 491 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 ZNF131P52739 623 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 PTENP60484 403 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 MDM2Q00987 491 aaPredicted RBP21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 FAM160A1Q05DH4 1040 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 RAD51AP2Q09MP3 1159 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 CAPSQ13938 189 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 LPIN1Q14693 890 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 PLEKHG4Q58EX7 1191 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 ODR4Q5SWX8 454 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 TSHZ1Q6ZSZ6 1077 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 SRGAP1Q7Z6B7 1085 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 RNF149Q8NC42 400 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 TMEM40Q8WWA1 233 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 IFT74Q96LB3 600 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 PPP1R16BQ96T49 567 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 C7orf25Q9BPX7 421 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 NTPCRQ9BSD7 190 aaKnown RBP21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 OSBPL7Q9BZF2 842 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 POLD4Q9HCU8 107 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 GINS2Q9Y248 185 aa21.44■■□□□ 1.02
PCOLCE-208ENST00000487172 MAGEA10P43363 369 aaPredicted RBP21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 KANK3Q6NY19 840 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 KRBA2Q6ZNG9 492 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 SPIRE2Q8WWL2 714 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 BSNDQ8WZ55 320 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 STAMQ92783 540 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 TIGD1Q96MW7 591 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 GDF15Q99988 308 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 TRIM9Q9C026 710 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 LMBRD1Q9NUN5 540 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 LARSQ9P2J5 1176 aaKnown RBP21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 NOC2LQ9Y3T9 749 aaKnown RBP21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 MYH11P35749 1972 aa21.43■■□□□ 1.02
PCOLCE-208ENST00000487172 GOLGA6L22H0YM25 854 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 RPS6KA5O75582 802 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 MYL1P05976 194 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 GHRP10912 638 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 PLS3P13797 630 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 PHKA2P46019 1235 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 PCBP1Q15365 356 aaKnown RBP eCLIP21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 CDCA2Q69YH5 1023 aaPredicted RBP21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 DYMQ7RTS9 669 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 CNNM3Q8NE01 707 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 APBB2Q92870 758 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 KCNN1Q92952 543 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 PAGE5Q96GU1 130 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 CCDC34Q96HJ3 373 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 ZNF668Q96K58 619 aaPredicted RBP21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 SCLT1Q96NL6 688 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 AGO3Q9H9G7 860 aaKnown RBP21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 PARVGQ9HBI0 331 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 PCDH10Q9P2E7 1040 aa21.42■■□□□ 1.02
PCOLCE-208ENST00000487172 FRMD3A2A2Y4 597 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 SFI1A8K8P3 1242 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 GPR182O15218 404 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 FAM13AO94988 1023 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 LIG1P18858 919 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 NPTX2P47972 431 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 PEX3P56589 373 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 CACNB1Q02641 598 aaPredicted RBP21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 DMP1Q13316 513 aaPredicted RBP21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 CNKSR3Q6P9H4 555 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 PSRC1Q6PGN9 363 aaPredicted RBP21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 C16orf59Q7L2K0 433 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 DEFB128Q7Z7B8 93 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 FAM228AQ86W67 206 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 ELOA2Q8IYF1 753 aaPredicted RBP21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 DBF4BQ8NFT6 615 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 SEPT8Q92599 483 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 IFIH1Q9BYX4 1025 aaKnown RBP21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 C2orf40Q9H1Z8 148 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 ERVK-5Q9HDB9 667 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 PADI3Q9ULW8 664 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 TET1Q8NFU7 2136 aa21.41■■□□□ 1.02
PCOLCE-208ENST00000487172 LRRIQ4A6NIV6 560 aa21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 TBCAO75347 108 aaKnown RBP21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 NR1I2O75469 434 aa21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 GAP43P17677 238 aa21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 BMP8BP34820 402 aa21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 AFMP43652 599 aa21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 SMTNP53814 917 aa21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 SEL1LQ9UBV2 794 aa21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 ST3GAL5Q9UNP4 418 aa21.4■■□□□ 1.02
PCOLCE-208ENST00000487172 PHLPP2Q6ZVD8 1323 aa21.39■■□□□ 1.01
PCOLCE-208ENST00000487172 ACRP10323 421 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms