RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 RNF149Q8NC42 400 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 RNF169Q8NCN4 708 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 GDPD5Q8WTR4 605 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
BRD9-203ENST00000475706 KIAA1024Q9UPX6 916 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 ADGRA3Q8IWK6 1321 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 C9IYK1 514 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 CDC25AP30304 524 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 GRB10Q13322 594 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 TFDP1Q14186 410 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 ECM1Q16610 540 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 FAM43BQ6ZT52 329 aaPredicted RBP12.89□□□□□ -0.35
BRD9-203ENST00000475706 SRGAP1Q7Z6B7 1085 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 TMEM192Q8IY95 271 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 IGSF22Q8N9C0 903 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 SLC17A8Q8NDX2 589 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 SAMD11Q96NU1 681 aa12.89□□□□□ -0.35
BRD9-203ENST00000475706 POLR3FQ9H1D9 316 aaPredicted RBP12.89□□□□□ -0.35
BRD9-203ENST00000475706 DDX19AQ9NUU7 478 aaKnown RBP12.89□□□□□ -0.35
BRD9-203ENST00000475706 DBR1Q9UK59 544 aaKnown RBP12.89□□□□□ -0.35
BRD9-203ENST00000475706 PIN4Q9Y237 131 aaKnown RBP12.89□□□□□ -0.35
BRD9-203ENST00000475706 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 MUTP22033 750 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 CTNNB1P35222 781 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 PHKA2P46019 1235 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 GPM6BQ13491 265 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
BRD9-203ENST00000475706 SF3A1Q15459 793 aaKnown RBP12.88□□□□□ -0.35
BRD9-203ENST00000475706 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 SPOUT1Q5T280 376 aaKnown RBP12.88□□□□□ -0.35
BRD9-203ENST00000475706 FAM102BQ5T8I3 360 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
BRD9-203ENST00000475706 CMTR2Q8IYT2 770 aaKnown RBP12.88□□□□□ -0.35
BRD9-203ENST00000475706 ASAP3Q8TDY4 903 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
BRD9-203ENST00000475706 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 PLIN2Q99541 437 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 IFT122Q9HBG6 1241 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 GPRC5CQ9NQ84 441 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 TMEM161AQ9NX61 479 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 TDRD15B5MCY1 1934 aaKnown RBP12.88□□□□□ -0.35
BRD9-203ENST00000475706 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
BRD9-203ENST00000475706 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 LRRIQ4A6NIV6 560 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 E9PMD0 336 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 INO80B-WBP1J3KQ70 363 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 STX6O43752 255 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 BMP15O95972 392 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 GLRA2P23416 452 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 ARL2P36404 184 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 FAM189BP81408 668 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 CEBPZQ03701 1054 aaKnown RBP12.87□□□□□ -0.35
BRD9-203ENST00000475706 RESTQ13127 1097 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 ARL6IP4Q66PJ3 421 aaKnown RBP12.87□□□□□ -0.35
BRD9-203ENST00000475706 FAM173BQ6P4H8 233 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 ECHDC2Q86YB7 292 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 CRIPAKQ8N1N5 446 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 MCPH1Q8NEM0 835 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 ELAC1Q9H777 363 aaKnown RBP12.87□□□□□ -0.35
BRD9-203ENST00000475706 MINDY3Q9H8M7 445 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 RC3H2Q9HBD1 1191 aaKnown RBP12.87□□□□□ -0.35
BRD9-203ENST00000475706 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 DNM3Q9UQ16 869 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 MTMR6Q9Y217 621 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
BRD9-203ENST00000475706 MRPL42Q9Y6G3 142 aaKnown RBP12.87□□□□□ -0.35
BRD9-203ENST00000475706 TCF20Q9UGU0 1960 aaKnown RBP12.87□□□□□ -0.35
BRD9-203ENST00000475706 COL4A6Q14031 1691 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 LPXNO60711 386 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 ERLIN2O94905 339 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 FGFR1P11362 822 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 CYP11B2P19099 503 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 BMPR1AP36894 532 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 PTENP60484 403 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 CAPSQ13938 189 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 SKIV2LQ15477 1246 aaKnown RBP12.86□□□□□ -0.35
BRD9-203ENST00000475706 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 FOXD4L5Q5VV16 416 aaPredicted RBP12.86□□□□□ -0.35
BRD9-203ENST00000475706 ABI1Q8IZP0 508 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 FOXD4L4Q8WXT5 416 aaPredicted RBP12.86□□□□□ -0.35
BRD9-203ENST00000475706 MMTAG2Q9BU76 263 aaKnown RBP12.86□□□□□ -0.35
BRD9-203ENST00000475706 RWDD3Q9Y3V2 267 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 CLIC4Q9Y696 253 aa12.86□□□□□ -0.35
BRD9-203ENST00000475706 A0A0U1RQF3 1178 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 H3BNC9 293 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 HOXA2O43364 376 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 CSPG5O95196 566 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 EYA4O95677 639 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 SSBP05455 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
BRD9-203ENST00000475706 RB1P06400 928 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 LIG1P18858 919 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms