RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PLS1Q14651 629 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 HERC4Q5GLZ8 1057 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 AMIGO3Q86WK7 504 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 SLC35G2Q8TBE7 412 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 NSUN4Q96CB9 384 aaKnown RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 SLC4A9Q96Q91 983 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 MTMR9Q96QG7 549 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 PAPOLBQ9NRJ5 636 aaKnown RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 ANKRD36CQ5JPF3 1778 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 DDX3YO15523 660 aaKnown RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 GFPT2O94808 682 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 FESP07332 822 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 PON1P27169 355 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 MGAT5Q09328 741 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 MAPK7Q13164 816 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 EXOC3L4Q17RC7 722 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 TAOK1Q7L7X3 1001 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 DGKHQ86XP1 1220 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 REXO1Q8N1G1 1221 aaKnown RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 GBP7Q8N8V2 638 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 UTP4Q969X6 686 aaKnown RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 MKNK2Q9HBH9 465 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 ARL2BPQ9Y2Y0 163 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 ZNF804BA4D1E1 1349 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 RIPK2O43353 540 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 TSPY3P0CV98 308 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 TSPY8P0CW00 308 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 PRDX5P30044 214 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 PAPOLAP51003 745 aaKnown RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 MXRA7P84157 204 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 CCDC152Q4G0S7 254 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 ZNF34Q8IZ26 560 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 SCFD1Q8WVM8 642 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 RXFP1Q9HBX9 757 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 ARPP21Q9UBL0 812 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 CTNNAL1Q9UBT7 734 aa14.85□□□□□ -0.03
NPHP4-207ENST00000470763 BZW2Q9Y6E2 419 aaKnown RBP14.85□□□□□ -0.03
NPHP4-207ENST00000470763 E9PMD0 336 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 H0Y3Z8 333 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 AHCYL1O43865 530 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 GNA14O95837 355 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 GNA11P29992 359 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 RAD23BP54727 409 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 DPY19L2P1Q6NXN4 242 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 GLYCTKQ8IVS8 523 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 ALG3Q92685 438 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 ARHGEF2Q92974 986 aaKnown RBP14.84□□□□□ -0.03
NPHP4-207ENST00000470763 TMEM237Q96Q45 408 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 PTPN22Q9Y2R2 807 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 LOC102724428A0A0B4J2F2 783 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 ACSL3O95573 720 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 CYP19A1P11511 503 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-207ENST00000470763 SIK1P57059 783 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 USP17L2Q6R6M4 530 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 VPS36Q86VN1 386 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 CNBD1Q8NA66 436 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 ANKLE1Q8NAG6 615 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 CRAMP1Q96RY5 1269 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 TMEM47Q9BQJ4 181 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 ZCWPW1Q9H0M4 648 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 EMILIN3Q9NT22 766 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 COL4A1P02462 1669 aa14.84□□□□□ -0.03
NPHP4-207ENST00000470763 ANKRD63C9JTQ0 380 aa14.83□□□□□ -0.03
NPHP4-207ENST00000470763 CETN3O15182 167 aa14.83□□□□□ -0.03
NPHP4-207ENST00000470763 RPS6KA3P51812 740 aa14.83□□□□□ -0.03
NPHP4-207ENST00000470763 PIGSQ96S52 555 aa14.83□□□□□ -0.03
NPHP4-207ENST00000470763 DDX23Q9BUQ8 820 aaKnown RBP14.83□□□□□ -0.03
NPHP4-207ENST00000470763 KCTD10Q9H3F6 313 aa14.83□□□□□ -0.03
NPHP4-207ENST00000470763 PALM3A6NDB9 673 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-207ENST00000470763 KLRK1P26718 216 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.04
NPHP4-207ENST00000470763 ARMC3Q5W041 872 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 SEPT14Q6ZU15 432 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 LNX1Q8TBB1 728 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-207ENST00000470763 SYT15Q9BQS2 421 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 RASAL2Q9UJF2 1139 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 COL24A1Q17RW2 1714 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 LRRD1A4D1F6 860 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 GJB6O95452 261 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 CASP5P51878 434 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 MARSP56192 900 aaKnown RBP14.83□□□□□ -0.04
NPHP4-207ENST00000470763 TNIP1Q15025 636 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 CAVIN4Q5BKX8 364 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 VSTM1Q6UX27 236 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 FBF1Q8TES7 1133 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 STMN4Q9H169 189 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-207ENST00000470763 ATP8A2Q9NTI2 1148 aa14.83□□□□□ -0.04
NPHP4-207ENST00000470763 SEPT11Q9NVA2 429 aaKnown RBP14.83□□□□□ -0.04
NPHP4-207ENST00000470763 MTRF1LQ9UGC7 380 aaKnown RBP14.83□□□□□ -0.04
NPHP4-207ENST00000470763 PFASO15067 1338 aa14.82□□□□□ -0.04
NPHP4-207ENST00000470763 FAM187AA6NFU0 413 aa14.82□□□□□ -0.04
NPHP4-207ENST00000470763 CCNG1P51959 295 aa14.82□□□□□ -0.04
NPHP4-207ENST00000470763 ITPK1Q13572 414 aa14.82□□□□□ -0.04
NPHP4-207ENST00000470763 TMEM119Q4V9L6 283 aa14.82□□□□□ -0.04
NPHP4-207ENST00000470763 SPTY2D1Q68D10 685 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-207ENST00000470763 CGB2Q6NT52 195 aa14.82□□□□□ -0.04
NPHP4-207ENST00000470763 SMIM5Q71RC9 77 aa14.82□□□□□ -0.04
NPHP4-207ENST00000470763 KSR1Q8IVT5 923 aa14.82□□□□□ -0.04
NPHP4-207ENST00000470763 LINC00116Q8NCU8 138 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms