RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CXCL9Q07325 125 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 NFX1Q12986 1120 aaKnown RBP14.83□□□□□ -0.04
BRAT1-203ENST00000467558 CYFIP1Q7L576 1253 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 FAM83AQ86UY5 434 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 CATSPER3Q86XQ3 398 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 FAM217BQ9NTX9 383 aaPredicted RBP14.83□□□□□ -0.04
BRAT1-203ENST00000467558 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.83□□□□□ -0.04
BRAT1-203ENST00000467558 RBAKQ9NYW8 714 aaPredicted RBP14.83□□□□□ -0.04
BRAT1-203ENST00000467558 ANAPC7Q9UJX3 599 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 KIF13AQ9H1H9 1805 aa14.83□□□□□ -0.04
BRAT1-203ENST00000467558 RNF40O75150 1001 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 GGPS1O95749 300 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 ZNF394Q53GI3 561 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 FBXO38Q6PIJ6 1188 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 RPUSD2Q8IZ73 545 aaKnown RBP14.82□□□□□ -0.04
BRAT1-203ENST00000467558 ANKRD42Q8N9B4 389 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 CAPS2Q9BXY5 557 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SYNJ2BP-COX16A0A087WUM0 186 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SSU72P8A0A1W2PR75 194 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SHMT1P34896 483 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 ATP1A2P50993 1020 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 AP3M2P53677 418 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 IFRD2Q12894 506 aaPredicted RBP14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SNX1Q13596 522 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 EMBQ6PCB8 327 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 CHST13Q8NET6 341 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 CCHCR1Q8TD31 782 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SH2D3AQ9BRG2 576 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 CALN1Q9BXU9 219 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 COX16Q9P0S2 106 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 MSH4O15457 936 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 PLS3P13797 630 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SOX5P35711 763 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 ARHGAP25P42331 645 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 GPC3P51654 580 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 PHLDB2Q86SQ0 1253 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 TEX2Q8IWB9 1127 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 TC2NQ8N9U0 490 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 CCDC110Q8TBZ0 833 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 TBC1D31Q96DN5 1066 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 CHP1Q99653 195 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 AP1M1Q9BXS5 423 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 ATP8A1Q9Y2Q0 1164 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 MCF2LO15068 1137 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SLC25A27O95847 323 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 DR1Q01658 176 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 SYT2Q8N9I0 419 aaPredicted RBP14.82□□□□□ -0.04
BRAT1-203ENST00000467558 IDI2Q9BXS1 227 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 KBTBD4Q9NVX7 518 aa14.82□□□□□ -0.04
BRAT1-203ENST00000467558 MRC1P22897 1456 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 PFASO15067 1338 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 I3L4J1 428 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 INPP5BP32019 993 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 SREBF1P36956 1147 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 DHX9Q08211 1270 aaKnown RBP14.81□□□□□ -0.04
BRAT1-203ENST00000467558 RSRC2Q7L4I2 434 aaKnown RBP14.81□□□□□ -0.04
BRAT1-203ENST00000467558 GLYCTKQ8IVS8 523 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 CCDC13Q8IYE1 715 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 FUCA2Q9BTY2 467 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.81□□□□□ -0.04
BRAT1-203ENST00000467558 AK9Q5TCS8 1911 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 EIF3DO15371 548 aaKnown RBP eCLIP14.81□□□□□ -0.04
BRAT1-203ENST00000467558 PRPSAP2O60256 369 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 ABL1P00519 1130 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 ANXA13P27216 316 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 CUL1Q13616 776 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 VSIG1Q86XK7 387 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 MKNK1Q9BUB5 465 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 ZMYND15Q9H091 742 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 WTIPA6NIX2 430 aaPredicted RBP14.81□□□□□ -0.04
BRAT1-203ENST00000467558 SRGAP2O75044 1071 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 ZRANB2O95218 330 aaKnown RBP eCLIP14.81□□□□□ -0.041e-5■■■■□ 25.7
BRAT1-203ENST00000467558 FTLP02792 175 aaPredicted RBP14.81□□□□□ -0.04
BRAT1-203ENST00000467558 SLMAPQ14BN4 828 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 DUOXA2Q1HG44 320 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 CAPN12Q6ZSI9 719 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 ANKRD13AQ8IZ07 590 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 RDM1Q8NG50 284 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 MGARPQ8TDB4 240 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 MOV10L1Q9BXT6 1211 aaKnown RBP14.81□□□□□ -0.04
BRAT1-203ENST00000467558 MAP3K20Q9NYL2 800 aaKnown RBP14.81□□□□□ -0.04
BRAT1-203ENST00000467558 HSPBP1Q9NZL4 362 aa14.81□□□□□ -0.04
BRAT1-203ENST00000467558 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
BRAT1-203ENST00000467558 MYL3P08590 195 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 ARL4AP40617 200 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 GRB10Q13322 594 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 SNAPC2Q13487 334 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 CASP8Q14790 479 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 ZSCAN26Q16670 478 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 DACT2Q5SW24 774 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 RASGRP2Q7LDG7 609 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 OR6B3Q8NGW1 331 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 SLC38A10Q9HBR0 1119 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 ABCB6Q9NP58 842 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 ANKEF1Q9NU02 776 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 ANAPC5Q9UJX4 755 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 PEAK1Q9H792 1746 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 CALB1P05937 261 aa14.8□□□□□ -0.04
BRAT1-203ENST00000467558 MYBP10242 640 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms