RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 ECM1Q16610 540 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 KRT79Q5XKE5 535 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 HAUS3Q68CZ6 603 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 TRAF7Q6Q0C0 670 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 RUFY4Q6ZNE9 571 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 RNF135Q8IUD6 432 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 TMEM192Q8IY95 271 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 AK8Q96MA6 479 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 PCDHA2Q9Y5H9 948 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 KMT2EQ8IZD2 1858 aa21.32■■□□□ 1
USP11-205ENST00000467378 A0A087WWV3 80 aa21.32■■□□□ 1
USP11-205ENST00000467378 PPP6R2O75170 966 aa21.32■■□□□ 1
USP11-205ENST00000467378 C22orf31O95567 290 aa21.32■■□□□ 1
USP11-205ENST00000467378 XRCC6P12956 609 aaKnown RBP eCLIP21.32■■□□□ 1
USP11-205ENST00000467378 CCT6AP40227 531 aaKnown RBP21.32■■□□□ 1
USP11-205ENST00000467378 COL19A1Q14993 1142 aa21.32■■□□□ 1
USP11-205ENST00000467378 SMAD2Q15796 467 aaKnown RBP21.32■■□□□ 1
USP11-205ENST00000467378 MTERF2Q49AM1 385 aa21.32■■□□□ 1
USP11-205ENST00000467378 IER5LQ5T953 404 aa21.32■■□□□ 1
USP11-205ENST00000467378 PLA2G4FQ68DD2 849 aa21.32■■□□□ 1
USP11-205ENST00000467378 ZNF579Q8NAF0 562 aaKnown RBP21.32■■□□□ 1
USP11-205ENST00000467378 SNX29Q8TEQ0 813 aa21.32■■□□□ 1
USP11-205ENST00000467378 CHAMP1Q96JM3 812 aa21.32■■□□□ 1
USP11-205ENST00000467378 SH2D3AQ9BRG2 576 aa21.32■■□□□ 1
USP11-205ENST00000467378 CFAP45Q9UL16 551 aa21.32■■□□□ 1
USP11-205ENST00000467378 SPTLC2O15270 562 aa21.31■■□□□ 1
USP11-205ENST00000467378 UPP2O95045 317 aa21.31■■□□□ 1
USP11-205ENST00000467378 LTBRP36941 435 aa21.31■■□□□ 1
USP11-205ENST00000467378 NPEPPSP55786 919 aa21.31■■□□□ 1
USP11-205ENST00000467378 OTUD6AQ7L8S5 288 aa21.31■■□□□ 1
USP11-205ENST00000467378 EDAQ92838 391 aa21.31■■□□□ 1
USP11-205ENST00000467378 PBXIP1Q96AQ6 731 aa21.31■■□□□ 1
USP11-205ENST00000467378 CLIC6Q96NY7 704 aa21.31■■□□□ 1
USP11-205ENST00000467378 CSRNP2Q9H175 543 aa21.31■■□□□ 1
USP11-205ENST00000467378 CYP26B1Q9NR63 512 aa21.31■■□□□ 1
USP11-205ENST00000467378 ANKEF1Q9NU02 776 aa21.31■■□□□ 1
USP11-205ENST00000467378 RCOR1Q9UKL0 485 aa21.31■■□□□ 1
USP11-205ENST00000467378 CIZ1Q9ULV3 898 aaPredicted RBP21.31■■□□□ 1
USP11-205ENST00000467378 ATP6V1DQ9Y5K8 247 aa21.31■■□□□ 1
USP11-205ENST00000467378 SMIM35A0A1B0GVV1 85 aa21.3■■□□□ 1
USP11-205ENST00000467378 MAGEB2O15479 319 aa21.3■■□□□ 1
USP11-205ENST00000467378 MBTPS2O43462 519 aa21.3■■□□□ 1
USP11-205ENST00000467378 NCK2O43639 380 aa21.3■■□□□ 1
USP11-205ENST00000467378 HYIQ5T013 277 aa21.3■■□□□ 1
USP11-205ENST00000467378 TAF2Q6P1X5 1199 aa21.3■■□□□ 1
USP11-205ENST00000467378 POTEGQ6S5H5 508 aa21.3■■□□□ 1
USP11-205ENST00000467378 KRI1Q8N9T8 703 aaKnown RBP21.3■■□□□ 1
USP11-205ENST00000467378 PIGOQ8TEQ8 1089 aa21.3■■□□□ 1
USP11-205ENST00000467378 CEP170P1Q96L14 293 aa21.3■■□□□ 1
USP11-205ENST00000467378 PNMA5Q96PV4 448 aa21.3■■□□□ 1
USP11-205ENST00000467378 NACC1Q96RE7 527 aa21.3■■□□□ 1
USP11-205ENST00000467378 PRRX2Q99811 253 aa21.3■■□□□ 1
USP11-205ENST00000467378 ZDBF2Q9HCK1 2354 aa21.29■■□□□ 1
USP11-205ENST00000467378 IGKV6-21A0A0C4DH24 114 aa21.29■■□□□ 1
USP11-205ENST00000467378 RSPH10B2B2RC85 870 aa21.29■■□□□ 1
USP11-205ENST00000467378 MAFO75444 373 aaPredicted RBP21.29■■□□□ 1
USP11-205ENST00000467378 RSPH10BP0C881 870 aa21.29■■□□□ 1
USP11-205ENST00000467378 XKR9Q5GH70 373 aa21.29■■□□□ 1
USP11-205ENST00000467378 BMP8AQ7Z5Y6 402 aa21.29■■□□□ 1
USP11-205ENST00000467378 CABP7Q86V35 215 aa21.29■■□□□ 1
USP11-205ENST00000467378 SUGP1Q8IWZ8 645 aaKnown RBP21.29■■□□□ 1
USP11-205ENST00000467378 LINC01465Q8N7H1 131 aa21.29■■□□□ 1
USP11-205ENST00000467378 DNAJB3Q8WWF6 145 aa21.29■■□□□ 1
USP11-205ENST00000467378 IPO9Q96P70 1041 aaKnown RBP21.29■■□□□ 1
USP11-205ENST00000467378 KIAA1024Q9UPX6 916 aa21.29■■□□□ 1
USP11-205ENST00000467378 PPME1Q9Y570 386 aa21.29■■□□□ 1
USP11-205ENST00000467378 TMEM221A6NGB7 291 aa21.28■■□□□ 1
USP11-205ENST00000467378 M0R296 226 aa21.28■■□□□ 1
USP11-205ENST00000467378 GFRA3O60609 400 aa21.28■■□□□ 1
USP11-205ENST00000467378 THPOP40225 353 aa21.28■■□□□ 1
USP11-205ENST00000467378 RARRES1P49788 294 aa21.28■■□□□ 1
USP11-205ENST00000467378 KRT85P78386 507 aa21.28■■□□□ 1
USP11-205ENST00000467378 DLX2Q07687 328 aaPredicted RBP21.28■■□□□ 1
USP11-205ENST00000467378 TBC1D8BQ0IIM8 1120 aa21.28■■□□□ 1
USP11-205ENST00000467378 MKRN4PQ13434 485 aaPredicted RBP21.28■■□□□ 1
USP11-205ENST00000467378 SPECC1Q5M775 1068 aa21.28■■□□□ 1
USP11-205ENST00000467378 EFCAB12Q6NXP0 572 aa21.28■■□□□ 1
USP11-205ENST00000467378 USP49Q70CQ1 688 aa21.28■■□□□ 1
USP11-205ENST00000467378 KIAA0319LQ8IZA0 1049 aa21.28■■□□□ 1
USP11-205ENST00000467378 DDX19AQ9NUU7 478 aaKnown RBP21.28■■□□□ 1
USP11-205ENST00000467378 DBR1Q9UK59 544 aaKnown RBP21.28■■□□□ 1
USP11-205ENST00000467378 TRIOO75962 3097 aa21.28■■□□□ 1
USP11-205ENST00000467378 C5orf42Q9H799 3197 aa21.27■■□□□ 1
USP11-205ENST00000467378 SLC26A4O43511 780 aa21.27■■□□□ 1
USP11-205ENST00000467378 CAND2O75155 1236 aa21.27■■□□□ 1
USP11-205ENST00000467378 CTNNB1P35222 781 aa21.27■■□□□ 1
USP11-205ENST00000467378 UBA7P41226 1012 aa21.27■■□□□ 1
USP11-205ENST00000467378 TCF15Q12870 199 aa21.27■■□□□ 1
USP11-205ENST00000467378 PLEKHG4Q58EX7 1191 aa21.27■■□□□ 1
USP11-205ENST00000467378 FAM26DQ5JW98 314 aa21.27■■□□□ 1
USP11-205ENST00000467378 TRIM67Q6ZTA4 783 aa21.27■■□□□ 1
USP11-205ENST00000467378 NME8Q8N427 588 aa21.27■■□□□ 1
USP11-205ENST00000467378 KCNG4Q8TDN1 519 aa21.27■■□□□ 1
USP11-205ENST00000467378 TOP1MTQ969P6 601 aa21.27■■□□□ 1
USP11-205ENST00000467378 EPSTI1Q96J88 318 aa21.27■■□□□ 1
USP11-205ENST00000467378 CCSER1Q9C0I3 900 aa21.27■■□□□ 1
USP11-205ENST00000467378 FAM49AQ9H0Q0 323 aaPredicted RBP21.27■■□□□ 1
USP11-205ENST00000467378 DHX33Q9H6R0 707 aaKnown RBP21.27■■□□□ 1
USP11-205ENST00000467378 FAM86C1Q9NVL1 165 aa21.27■■□□□ 1
USP11-205ENST00000467378 COL4A6Q14031 1691 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms