RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SEC63Q9UGP8 760 aaKnown RBP6.26□□□□□ -1.41
VPS41-211ENST00000466017 PCDHA4Q9UN74 947 aa6.26□□□□□ -1.41
VPS41-211ENST00000466017 SCAF8Q9UPN6 1271 aaKnown RBP6.26□□□□□ -1.41
VPS41-211ENST00000466017 HIF3AQ9Y2N7 669 aa6.26□□□□□ -1.41
VPS41-211ENST00000466017 PCDHB5Q9Y5E4 795 aa6.26□□□□□ -1.41
VPS41-211ENST00000466017 ZHX2Q9Y6X8 837 aa6.26□□□□□ -1.41
VPS41-211ENST00000466017 FRMPD2Q68DX3 1309 aaPredicted RBP6.25□□□□□ -1.41
VPS41-211ENST00000466017 MYH6P13533 1939 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 A0A0G2JLL6 359 aaPredicted RBP6.25□□□□□ -1.41
VPS41-211ENST00000466017 SMCO2A6NFE2 343 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 DCDC2CA8MYV0 355 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 BTBD18B2RXH4 712 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 PPP6R2O75170 966 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 NTF4P34130 210 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 PPIL2Q13356 520 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 VGLL4Q14135 290 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 COG2Q14746 738 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 CCDC96Q2M329 555 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 QRICH1Q2TAL8 776 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 ZC3H12AQ5D1E8 599 aaKnown RBP6.25□□□□□ -1.41
VPS41-211ENST00000466017 FAM83BQ5T0W9 1011 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 WWC2Q6AWC2 1192 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 OTUD7BQ6GQQ9 843 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 LBX2Q6XYB7 198 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 FASTKD5Q7L8L6 764 aaKnown RBP6.25□□□□□ -1.41
VPS41-211ENST00000466017 PRRT2Q7Z6L0 340 aaPredicted RBP6.25□□□□□ -1.41
VPS41-211ENST00000466017 NOSTRINQ8IVI9 506 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 C2orf69Q8N8R5 385 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 LINC00301Q8NCQ3 95 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 AIFM3Q96NN9 605 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 FEZ1Q99689 392 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 ANP32EQ9BTT0 268 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 VAT1LQ9HCJ6 419 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 ZFP64Q9NPA5 681 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 RIC8AQ9NPQ8 531 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 TMOD4Q9NZQ9 345 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 VPS54Q9P1Q0 977 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 SLC45A1Q9Y2W3 748 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 DOCK1Q14185 1865 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 BAZ2BQ9UIF8 2168 aaKnown RBP6.25□□□□□ -1.41
VPS41-211ENST00000466017 ATAD5Q96QE3 1844 aa6.25□□□□□ -1.41
VPS41-211ENST00000466017 KIF28PB7ZC32 967 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 UBE2Q2LH0YL09 131 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 ZBED4O75132 1171 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 FOSP01100 380 aaPredicted RBP6.24□□□□□ -1.41
VPS41-211ENST00000466017 VCAM1P19320 739 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 SLC16A2P36021 539 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 NAPAP54920 295 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 DAB2P98082 770 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 GUCY1B3Q02153 619 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 ID3Q02535 119 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 CDK5R2Q13319 367 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 LRP8Q14114 963 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 SLC39A14Q15043 492 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 PTPAQ15257 358 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 CDC37Q16543 378 aaPredicted RBP6.24□□□□□ -1.41
VPS41-211ENST00000466017 TKFCQ3LXA3 575 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 PPM1JQ5JR12 505 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 ANO1Q5XXA6 986 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 PCNX4Q63HM2 1172 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 MCTP1Q6DN14 999 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 MOXD1Q6UVY6 613 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 ZAR1Q86SH2 424 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 MB21D1Q8N884 522 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 HHIPL1Q96JK4 782 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 NAP1L4Q99733 375 aaKnown RBP6.24□□□□□ -1.41
VPS41-211ENST00000466017 SLF1Q9BQI6 1058 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 SLC38A10Q9HBR0 1119 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 GBA2Q9HCG7 927 aaPredicted RBP6.24□□□□□ -1.41
VPS41-211ENST00000466017 ZCCHC17Q9NP64 241 aaKnown RBP6.24□□□□□ -1.41
VPS41-211ENST00000466017 KRT82Q9NSB4 513 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 GJB4Q9NTQ9 266 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 NOL7Q9UMY1 257 aaKnown RBP6.24□□□□□ -1.41
VPS41-211ENST00000466017 PCDHA6Q9UN73 950 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 KCNJ14Q9UNX9 436 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 CEP131Q9UPN4 1083 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 MRPL11Q9Y3B7 192 aaKnown RBP6.24□□□□□ -1.41
VPS41-211ENST00000466017 PCDHA8Q9Y5H6 950 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 PCDHA1Q9Y5I3 950 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 TCHHQ07283 1943 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 PHIPQ8WWQ0 1821 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 ABCB11O95342 1321 aa6.24□□□□□ -1.41
VPS41-211ENST00000466017 PAPPA2Q9BXP8 1791 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 A0A1W2PQ27 194 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 A0A1W2PQ64 194 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 A0A1W2PQD8 194 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 LAD1O00515 517 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 MEIS2O14770 477 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 GIPC1O14908 333 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 PPP1R11O60927 126 aaPredicted RBP6.23□□□□□ -1.41
VPS41-211ENST00000466017 DTNBO60941 627 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 LEFTY1O75610 366 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 MBD3O95983 291 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 ICAM1P05362 532 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 ZBTB48P10074 688 aaPredicted RBP6.23□□□□□ -1.41
VPS41-211ENST00000466017 EIF4BP23588 611 aaKnown RBP6.23□□□□□ -1.41
VPS41-211ENST00000466017 TOB1P50616 345 aaPredicted RBP6.23□□□□□ -1.41
VPS41-211ENST00000466017 INHBEP58166 350 aa6.23□□□□□ -1.41
VPS41-211ENST00000466017 UBE2HP62256 183 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms