RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 ZRANB2O95218 330 aaKnown RBP eCLIP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 CLEC2LP0C7M8 214 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 MYBL2P10244 700 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 PI3P19957 117 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 POLD1P28340 1107 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 RECQLP46063 649 aaPredicted RBP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 EFEMP1Q12805 493 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 SMAD4Q13485 552 aaKnown RBP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 PIN1Q13526 163 aaPredicted RBP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 PTPN21Q16825 1174 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 ABCB5Q2M3G0 1257 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 ANO4Q32M45 955 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 PHF19Q5T6S3 580 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 PRAMEF9Q5VWM5 478 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 GRAMD4Q6IC98 578 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 CNKSR3Q6P9H4 555 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 PGM2L1Q6PCE3 622 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 CMTR2Q8IYT2 770 aaKnown RBP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 CPA6Q8N4T0 437 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 NUDT10Q8NFP7 164 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 OR5AN1Q8NGI8 311 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 ZNF526Q8TF50 670 aaPredicted RBP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 JDP2Q8WYK2 163 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 RPGRQ92834 1020 aaKnown RBP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 ZBTB8AQ96BR9 441 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 MBD6Q96DN6 1003 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 NUDT11Q96G61 164 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 FDXACB1Q9BRP7 624 aaPredicted RBP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 KCTD10Q9H3F6 313 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 ZCCHC4Q9H5U6 513 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 FBXO10Q9UK96 956 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 FAN1Q9Y2M0 1017 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 GPR45Q9Y5Y3 372 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 CDY2AQ9Y6F7 541 aa2.59□□□□□ -1.99
NUCKS1-202ENST00000464938 A0A0G2JNJ9 132 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 A0A1W2PR48 441 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 C9orf118A6NHY6 69 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 DDX3XO00571 662 aaKnown RBP eCLIP2.58□□□□□ -2
NUCKS1-202ENST00000464938 MAFGO15525 162 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 MT-CO1P00395 513 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 LPLP06858 475 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 MTHFD2P13995 350 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 C5AR1P21730 350 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 ETV4P43268 484 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 SARSP49591 514 aaKnown RBP2.58□□□□□ -2
NUCKS1-202ENST00000464938 LGALS4P56470 323 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 SRSF2Q01130 221 aaKnown RBP2.58□□□□□ -2
NUCKS1-202ENST00000464938 LRRC41Q15345 812 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 DGKDQ16760 1214 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 WDR72Q3MJ13 1102 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 ZNF385BQ569K4 471 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 TOR2AQ5JU69 321 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 FAM26FQ5R3K3 315 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 NXNQ6DKJ4 435 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 CCDC62Q6P9F0 684 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 TTLL7Q6ZT98 887 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 Q6ZUG5 572 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 LARP4Q71RC2 724 aaKnown RBP eCLIP2.58□□□□□ -2
NUCKS1-202ENST00000464938 GAREM2Q75VX8 874 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 ZBTB46Q86UZ6 589 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 REXO1L1PQ8IX06 675 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 TCEAL8Q8IYN2 117 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 CARFQ8N187 725 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 CDYL2Q8N8U2 506 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 LINC01356Q8N9X3 169 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 OR14C36Q8NHC7 312 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 TGFBRAP1Q8WUH2 860 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 GAB3Q8WWW8 586 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 AUTS2Q8WXX7 1259 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 FERMT2Q96AC1 680 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 TEKT5Q96M29 485 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 ZSWIM3Q96MP5 696 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 PWWP2AQ96N64 755 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 NUP88Q99567 741 aaPredicted RBP2.58□□□□□ -2
NUCKS1-202ENST00000464938 SPATA25Q9BR10 227 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 IFT122Q9HBG6 1241 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 DNAJC28Q9NX36 388 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 MKS1Q9NXB0 559 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 CHPF2Q9P2E5 772 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 Q9UFV3 132 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 EVLQ9UI08 416 aaPredicted RBP2.58□□□□□ -2
NUCKS1-202ENST00000464938 TUBD1Q9UJT1 453 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 ADAM29Q9UKF5 820 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 CROTQ9UKG9 612 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 CNOT6Q9ULM6 557 aaKnown RBP2.58□□□□□ -2
NUCKS1-202ENST00000464938 PNMA8BQ9ULN7 279 aaPredicted RBP2.58□□□□□ -2
NUCKS1-202ENST00000464938 G3BP2Q9UN86 482 aaKnown RBP2.58□□□□□ -2
NUCKS1-202ENST00000464938 VWA7Q9Y334 891 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 PCDHB6Q9Y5E3 794 aa2.58□□□□□ -2
NUCKS1-202ENST00000464938 OTOL1A6NHN0 477 aaPredicted RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 MARCH6O60337 910 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 PCDH8O95206 1070 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 APOL3O95236 402 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 ZSCAN20P17040 1043 aaPredicted RBP2.57□□□□□ -2
NUCKS1-202ENST00000464938 AKAP5P24588 427 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 CSF2RBP32927 897 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 SLC5A3P53794 718 aa2.57□□□□□ -2
NUCKS1-202ENST00000464938 ADKP55263 362 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms