RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 TCP11Q8WWU5 503 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 MRPL38Q96DV4 380 aaKnown RBP20.04■□□□□ 0.8
LINC00960-201ENST00000463183 INO80BQ9C086 356 aaPredicted RBP20.04■□□□□ 0.8
LINC00960-201ENST00000463183 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
LINC00960-201ENST00000463183 PPME1Q9Y570 386 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 PCDHB6Q9Y5E3 794 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 COL4A6Q14031 1691 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 USO1O60763 962 aaKnown RBP20.03■□□□□ 0.8
LINC00960-201ENST00000463183 TRAPPC10P48553 1259 aa20.03■□□□□ 0.8
LINC00960-201ENST00000463183 MRPS5P82675 430 aaKnown RBP20.03■□□□□ 0.8
LINC00960-201ENST00000463183 POTEGQ6S5H5 508 aa20.03■□□□□ 0.8
LINC00960-201ENST00000463183 CATSPER3Q86XQ3 398 aa20.03■□□□□ 0.8
LINC00960-201ENST00000463183 RNF149Q8NC42 400 aa20.03■□□□□ 0.8
LINC00960-201ENST00000463183 ATXN2LQ8WWM7 1075 aaKnown RBP20.03■□□□□ 0.8
LINC00960-201ENST00000463183 CLP1Q92989 425 aaKnown RBP20.03■□□□□ 0.8
LINC00960-201ENST00000463183 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
LINC00960-201ENST00000463183 LYPLA2O95372 231 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 RB1P06400 928 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 SPATA31C1P0DKV0 1188 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 TOB1P50616 345 aaPredicted RBP20.02■□□□□ 0.8
LINC00960-201ENST00000463183 ORC2Q13416 577 aaPredicted RBP20.02■□□□□ 0.8
LINC00960-201ENST00000463183 FERMT3Q86UX7 667 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 ECHDC2Q86YB7 292 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 HLA-CQ95604 372 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 ASB2Q96Q27 587 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 XPNPEP1Q9NQW7 623 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 ANKEF1Q9NU02 776 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 DACT1Q9NYF0 836 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.02■□□□□ 0.8
LINC00960-201ENST00000463183 TTC28Q96AY4 2481 aa20.02■□□□□ 0.8
LINC00960-201ENST00000463183 RALGAPA2Q2PPJ7 1873 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 BRWD1Q9NSI6 2320 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 C5orf67F2Z3F1 127 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 DGAT1O75907 488 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 RARRES1P49788 294 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 KCNQ1P51787 676 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 FAM189BP81408 668 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 PTGDRQ13258 359 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 TIGD5Q53EQ6 642 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 TCEAL5Q5H9L2 206 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 KLHL23Q8NBE8 558 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 ELAC1Q9H777 363 aaKnown RBP20.02■□□□□ 0.79
LINC00960-201ENST00000463183 MINDY3Q9H8M7 445 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 IFT122Q9HBG6 1241 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 TUFT1Q9NNX1 390 aa20.02■□□□□ 0.79
LINC00960-201ENST00000463183 TYW1Q9NV66 732 aaKnown RBP20.02■□□□□ 0.79
LINC00960-201ENST00000463183 ARID2Q68CP9 1835 aa20.01■□□□□ 0.79
LINC00960-201ENST00000463183 GAS2O43903 313 aaKnown RBP20.01■□□□□ 0.79
LINC00960-201ENST00000463183 CCT6AP40227 531 aaKnown RBP20.01■□□□□ 0.79
LINC00960-201ENST00000463183 LARP1BQ659C4 914 aaKnown RBP20.01■□□□□ 0.79
LINC00960-201ENST00000463183 HELQQ8TDG4 1101 aa20.01■□□□□ 0.79
LINC00960-201ENST00000463183 ASAP3Q8TDY4 903 aa20.01■□□□□ 0.79
LINC00960-201ENST00000463183 LPPQ93052 612 aa20.01■□□□□ 0.79
LINC00960-201ENST00000463183 LRWD1Q9UFC0 647 aa20.01■□□□□ 0.79
LINC00960-201ENST00000463183 HOXA2O43364 376 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 ITGB1P05556 798 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 PHKA2P46019 1235 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 ZRSR1Q15695 479 aaKnown RBP20■□□□□ 0.79
LINC00960-201ENST00000463183 HAUS3Q68CZ6 603 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 FAM43BQ6ZT52 329 aaPredicted RBP20■□□□□ 0.79
LINC00960-201ENST00000463183 THNSL1Q8IYQ7 743 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 C4orf32Q8N8J7 132 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 NACC1Q96RE7 527 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 POLR3CQ9BUI4 534 aaPredicted RBP20■□□□□ 0.79
LINC00960-201ENST00000463183 PLVAPQ9BX97 442 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 TMEM117Q9H0C3 514 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 POLR3FQ9H1D9 316 aaPredicted RBP20■□□□□ 0.79
LINC00960-201ENST00000463183 NSUN3Q9H649 340 aaKnown RBP20■□□□□ 0.79
LINC00960-201ENST00000463183 GPRC5CQ9NQ84 441 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 CHST12Q9NRB3 414 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 AAASQ9NRG9 546 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 RNF19AQ9NV58 838 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 COG5Q9UP83 839 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 PLAGL2Q9UPG8 496 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 PCDHB12Q9Y5F1 795 aa20■□□□□ 0.79
LINC00960-201ENST00000463183 KIAA1671Q9BY89 1806 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 A0A0U1RQF3 1178 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 ARHGEF35A5YM69 484 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 INO80B-WBP1J3KQ70 363 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 ASAP2O43150 1006 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 ERLIN2O94905 339 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 PBX3P40426 434 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 TFDP1Q14186 410 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 AAK1Q2M2I8 961 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 CLLU1OSQ5K130 101 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 SRGAP1Q7Z6B7 1085 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 SNX29Q8TEQ0 813 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 SYMPKQ92797 1274 aaKnown RBP19.99■□□□□ 0.79
LINC00960-201ENST00000463183 CASD1Q96PB1 797 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 IGFLR1Q9H665 355 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 FOXD4L1Q9NU39 408 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 INPP5FQ9Y2H2 1132 aa19.99■□□□□ 0.79
LINC00960-201ENST00000463183 FNDC1Q4ZHG4 1894 aaPredicted RBP19.98■□□□□ 0.79
LINC00960-201ENST00000463183 VPS37CA5D8V6 355 aaPredicted RBP19.98■□□□□ 0.79
LINC00960-201ENST00000463183 PP2D1A8MPX8 630 aa19.98■□□□□ 0.79
LINC00960-201ENST00000463183 ATF7P17544 494 aaPredicted RBP19.98■□□□□ 0.79
LINC00960-201ENST00000463183 KCNA5P22460 613 aa19.98■□□□□ 0.79
LINC00960-201ENST00000463183 DNAJB1P25685 340 aa19.98■□□□□ 0.79
LINC00960-201ENST00000463183 RPA1P27694 616 aa19.98■□□□□ 0.79
LINC00960-201ENST00000463183 FXR2P51116 673 aaKnown RBP eCLIP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms