RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 NCOA5Q9HCD5 579 aaKnown RBP12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 VAT1LQ9HCJ6 419 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 DMGDHQ9UI17 866 aaKnown RBP12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 HPS5Q9UPZ3 1129 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 COL11A1P12107 1806 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 LRRD1A4D1F6 860 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 TACC1O75410 805 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 GNRH1P01148 92 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 IDEP14735 1019 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 Q3C1V9 767 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 SESTD1Q86VW0 696 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 RETREG2Q8NC44 543 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 ATL2Q8NHH9 583 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 PIK3R5Q8WYR1 880 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 CAPZA3Q96KX2 299 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 SEC63Q9UGP8 760 aaKnown RBP12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCPG1Q9ULG6 757 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 HYOU1Q9Y4L1 999 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 ASB3Q9Y575 518 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 ENC1O14682 589 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 PEX10O60683 326 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 FMNL1O95466 1100 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 PTPREP23469 700 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 PSMC4P43686 418 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 SNAP25P60880 206 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 TKFCQ3LXA3 575 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 WDR78Q5VTH9 848 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZNF513Q8N8E2 541 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCDC197Q8NCU1 140 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 COA7Q96BR5 231 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 YIPF3Q9GZM5 350 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 CAPN11Q9UMQ6 739 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 TNPO2O14787 897 aaKnown RBP12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZBTB5O15062 677 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 RNF8O76064 485 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 ALDH3A1P30838 453 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 SFSWAPQ12872 951 aaKnown RBP12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 LRRC23Q53EV4 343 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 C1QTNF12Q5T7M4 302 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 C8orf74Q6P047 294 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 TRMT44Q8IYL2 757 aaKnown RBP12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 KIRREL3Q8IZU9 778 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 SRBD1Q8N5C6 995 aaKnown RBP12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 MTMR8Q96EF0 704 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 PORCNQ9H237 461 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.47□□□□□ -0.411e-17■■■■■ 62.9
TRAPPC3-205ENST00000462715 FBXO40Q9UH90 709 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 IVNS1ABPQ9Y6Y0 642 aa12.47□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZNF536O15090 1300 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 GCOM1H8Y6P7 765 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 CPLX1O14810 134 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 N4BP3O15049 544 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 CYTH3O43739 400 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 SRGAP2O75044 1071 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 KRT14P02533 472 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 MYZAPP0CAP1 466 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 HOXD10P28358 340 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZNF131P52739 623 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 PPP2R2AP63151 447 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 SNX1Q13596 522 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 HHATQ5VTY9 493 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 PLEKHH3Q7Z736 793 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 FBXO11Q86XK2 927 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 CHST13Q8NET6 341 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 PPANQ9NQ55 473 aaKnown RBP12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.41
TRAPPC3-205ENST00000462715 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 GRID2IPA4D2P6 1211 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 GNAT1P11488 350 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 DRD4P21917 467 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 CD151P48509 253 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 SH3BGRP55822 239 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 SPDYCQ5MJ68 293 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 KCTD16Q68DU8 428 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 LMNTD2Q8IXW0 634 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 CMTR1Q8N1G2 835 aaKnown RBP12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 CCDC82Q8N4S0 544 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 GBP7Q8N8V2 638 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 LRRC45Q96CN5 670 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 RBM41Q96IZ5 413 aaKnown RBP12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 TRIM47Q96LD4 638 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 PLEKHG4BQ96PX9 1271 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 TRAPPC9Q96Q05 1148 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 PIGSQ96S52 555 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 AMNQ9BXJ7 453 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 JADE2Q9NQC1 790 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 FAM217BQ9NTX9 383 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 LMCD1Q9NZU5 365 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 CEP131Q9UPN4 1083 aa12.46□□□□□ -0.42
TRAPPC3-205ENST00000462715 LUC7L2Q9Y383 392 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms