RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 KANK3Q6NY19 840 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 STXBP4Q6ZWJ1 553 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 CATSPER4Q7RTX7 472 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 APBB1IPQ7Z5R6 666 aaPredicted RBP7.06□□□□□ -1.28
SF3B1-206ENST00000462613 FSIP1Q8NA03 581 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 PRPF31Q8WWY3 499 aaKnown RBP7.06□□□□□ -1.28
SF3B1-206ENST00000462613 DHX58Q96C10 678 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 RNPC3Q96LT9 517 aaKnown RBP7.06□□□□□ -1.28
SF3B1-206ENST00000462613 PNMA5Q96PV4 448 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 CTAGE1Q96RT6 745 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 PPP1R16BQ96T49 567 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 PANK2Q9BZ23 570 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 TNMDQ9H2S6 317 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 ZHX3Q9H4I2 956 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 GDPD2Q9HCC8 539 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 DACT1Q9NYF0 836 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 NLRC5Q86WI3 1866 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 TTC3P53804 2025 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 TRIP11Q15643 1979 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 TNRC18O15417 2968 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-206ENST00000462613 MYO9BQ13459 2157 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 A0A087WWV3 80 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 A0A087WZ62 844 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 A0A1B0GVL5 298 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 INO80B-WBP1J3KQ70 363 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 HIP1RO75146 1068 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 CHRNA1P02708 482 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 CXCL10P02778 98 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 AMHP03971 560 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 MYL1P05976 194 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 ACRP10323 421 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 SKIP12755 728 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 IDEP14735 1019 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 PFKFB1P16118 471 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 GAP43P17677 238 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 ITGB8P26012 769 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 AXLP30530 894 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 ARL2P36404 184 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 NAMPTP43490 491 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 SLC12A3P55017 1021 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 MGAT3Q09327 533 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 RAD51AP2Q09MP3 1159 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 STRN3Q13033 797 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 MCM6Q14566 821 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 ECM1Q16610 540 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 MAPK6Q16659 721 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 PLEKHG4Q58EX7 1191 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 SHC4Q6S5L8 630 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 CHRDL2Q6WN34 429 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 USP49Q70CQ1 688 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 FAM178BQ8IXR5 827 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 CCDC65Q8IXS2 484 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 HACE1Q8IYU2 909 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 TDHQ8IZJ6 230 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 LINC01465Q8N7H1 131 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 DBF4BQ8NFT6 615 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 WNT8BQ93098 351 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 ZBTB10Q96DT7 871 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 CEP89Q96ST8 783 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 SLC9A7Q96T83 725 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 GDF15Q99988 308 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 FDXACB1Q9BRP7 624 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-206ENST00000462613 ADPGKQ9BRR6 497 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 NFKBIZQ9BYH8 718 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 PARVGQ9HBI0 331 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 KMT5AQ9NQR1 393 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 XPNPEP1Q9NQW7 623 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 C1orf112Q9NSG2 853 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 PRMT7Q9NVM4 692 aaPredicted RBP7.05□□□□□ -1.28
SF3B1-206ENST00000462613 SEL1LQ9UBV2 794 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 LRFN2Q9ULH4 789 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 SLC4A7Q9Y6M7 1214 aa7.05□□□□□ -1.28
SF3B1-206ENST00000462613 RALGAPA2Q2PPJ7 1873 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 FNDC1Q4ZHG4 1894 aaPredicted RBP7.04□□□□□ -1.28
SF3B1-206ENST00000462613 PTPRSQ13332 1948 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 K7ERI5 159 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 KINO60870 393 aaKnown RBP7.04□□□□□ -1.28
SF3B1-206ENST00000462613 NBNO60934 754 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 GPR32O75388 356 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 SLFN14P0C7P3 912 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 STAG3L1P0CL83 205 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 PLS3P13797 630 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 DARSP14868 501 aaKnown RBP7.04□□□□□ -1.28
SF3B1-206ENST00000462613 GLRA2P23416 452 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 CD52P31358 61 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 PEX3P56589 373 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 PTENP60484 403 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 UBE2HP62256 183 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 ASIC1P78348 528 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 DRP2Q13474 957 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 LPIN1Q14693 890 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 TMEM240Q5SV17 173 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 TWF2Q6IBS0 349 aaKnown RBP7.04□□□□□ -1.28
SF3B1-206ENST00000462613 NOTUMQ6P988 496 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 C1orf186Q6ZWK4 172 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 ZNF365Q70YC5 407 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 OTOP2Q7RTS6 562 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 DYMQ7RTS9 669 aa7.04□□□□□ -1.28
SF3B1-206ENST00000462613 KCNK18Q7Z418 384 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms