RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TEX13BQ9BXU2 312 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 GSX2Q9BZM3 304 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 CLMPQ9H6B4 373 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 PPP1R9AQ9ULJ8 1098 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 PRR12Q9ULL5 1215 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 SRPK3Q9UPE1 567 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 MSRB2Q9Y3D2 182 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 NEUROG3Q9Y4Z2 214 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 KCNMB2Q9Y691 235 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 NAV3Q8IVL0 2385 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 RALGAPA1Q6GYQ0 2036 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 PCNX2A6NKB5 2137 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 ADGRG4Q8IZF6 3080 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 RBM47A0AV96 593 aaKnown RBP6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 FSCN2O14926 492 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 FOXD2O60548 495 aaPredicted RBP6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 KPNA6O60684 536 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 MAP3K6O95382 1288 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 CPT1AP50416 773 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 FGD1P98174 961 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 ITIH3Q06033 890 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 PCSK7Q16549 785 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 LPAL2Q16609 132 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 STPG1Q5TH74 334 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 CELF5Q8N6W0 485 aaKnown RBP6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 TDRD5Q8NAT2 981 aaKnown RBP6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 MORC4Q8TE76 937 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 KAT2BQ92831 832 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 LRIG1Q96JA1 1093 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 FAM129BQ96TA1 746 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 FOXQ1Q9C009 403 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 EHD4Q9H223 541 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 SAP30BPQ9UHR5 308 aaKnown RBP6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 TMX2Q9Y320 296 aa6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 MRPL42Q9Y6G3 142 aaKnown RBP6.4□□□□□ -1.38
SBDSP1-204ENST00000453858 EMSYQ7Z589 1322 aa6.4□□□□□ -1.39
SBDSP1-204ENST00000453858 ADGRA3Q8IWK6 1321 aa6.4□□□□□ -1.39
SBDSP1-204ENST00000453858 SHROOM3Q8TF72 1996 aa6.4□□□□□ -1.39
SBDSP1-204ENST00000453858 BSNQ9UPA5 3926 aa6.4□□□□□ -1.39
SBDSP1-204ENST00000453858 DOCK8Q8NF50 2099 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 FSD2A1L4K1 749 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 LAMTOR5O43504 91 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 DGKIO75912 1065 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 MMP3P08254 477 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 WEE2P0C1S8 567 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 ARAFP10398 606 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 CD33P20138 364 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 ADORA1P30542 326 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 GSK3AP49840 483 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 MFAP1P55081 439 aaKnown RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 STARD6P59095 220 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 CTBSQ01459 385 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 KRT76Q01546 638 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 SRSF11Q05519 484 aaKnown RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 C8orf34Q49A92 452 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 ZNF468Q5VIY5 522 aaPredicted RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 SNRNP48Q6IEG0 339 aaKnown RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 TSSK4Q6SA08 328 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 SLC4A10Q6U841 1118 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 SLC44A3Q8N4M1 653 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 HNRNPLLQ8WVV9 542 aaKnown RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 ALKBH8Q96BT7 664 aaKnown RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 DDX23Q9BUQ8 820 aaKnown RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 CHMP4AQ9BY43 222 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 VCPKMTQ9H867 229 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 SERPINB13Q9UIV8 391 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 CA14Q9ULX7 337 aa6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 MTF2Q9Y483 593 aaPredicted RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.39□□□□□ -1.39
SBDSP1-204ENST00000453858 TTC3P53804 2025 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 ASB14A6NK59 587 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 SIN3BO75182 1162 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 MTHFRP42898 656 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 RFX5P48382 616 aaPredicted RBP6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 RIPPLY3P57055 190 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 GSTO1P78417 241 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 PLCB3Q01970 1234 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 GABPAQ06546 454 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 GAS6Q14393 721 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 TTC39BQ5VTQ0 682 aaPredicted RBP6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 KANK3Q6NY19 840 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 ATF7IPQ6VMQ6 1270 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 KIAA1211Q6ZU35 1233 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 ADGRA1Q86SQ6 560 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 FBXO16Q8IX29 292 aaPredicted RBP6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 ANKRD35Q8N283 1001 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 FAM126AQ9BYI3 521 aaPredicted RBP6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 WDR11Q9BZH6 1224 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 CABP5Q9NP86 173 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 PRMT8Q9NR22 394 aaPredicted RBP6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 SPATA6Q9NWH7 488 aaPredicted RBP6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 AATFQ9NY61 560 aaKnown RBP eCLIP6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 IGSF9Q9P2J2 1179 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 GTF2IRD1Q9UHL9 959 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 GDF2Q9UK05 429 aaPredicted RBP6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 PATJQ8NI35 1801 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 MTORP42345 2549 aa6.38□□□□□ -1.39
SBDSP1-204ENST00000453858 RSPH10B2B2RC85 870 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 EYA2O00167 538 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms