RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 TRPA1O75762 1119 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CD2BP2O95400 341 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 STAU1O95793 577 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ZFYP08048 801 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 GSTT2P0CG29 244 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 GSTT2BP0CG30 244 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PRKACAP17612 351 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 RPL9P32969 192 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 PTGS2P35354 604 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 GJA5P36382 358 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 EXOSC9Q06265 439 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ACTN3Q08043 901 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CACNB2Q08289 660 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 KIF22Q14807 665 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 WDR43Q15061 677 aaKnown RBP eCLIP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 INSCQ1MX18 579 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 TCERG1LQ5VWI1 586 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 OTUD7BQ6GQQ9 843 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 DBX2Q6ZNG2 339 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 BZW1Q7L1Q6 419 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 BRAPQ7Z569 592 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 SRGAP1Q7Z6B7 1085 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 EXOC3L1Q86VI1 746 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 C7orf61Q8IZ16 206 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 MRPL50Q8N5N7 158 aaKnown RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC155Q8N6L0 562 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 IL17RDQ8NFM7 739 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 SLC7A3Q8WY07 619 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 SNF8Q96H20 258 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ERO1AQ96HE7 468 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ACAP3Q96P50 834 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 ZPBPQ9BS86 351 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 SLC13A1Q9BZW2 595 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 C8orf4Q9NR00 106 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 BLOC1S4Q9NUP1 217 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 RGS17Q9UGC6 210 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 DPP7Q9UHL4 492 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 GRID1Q9ULK0 1009 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 TTC7AQ9ULT0 858 aaPredicted RBP5.37□□□□□ -1.55
EPHA3-202ENST00000452448 FAM135BQ49AJ0 1406 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 SAMD9LQ8IVG5 1584 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 DUOX2Q9NRD8 1548 aa5.37□□□□□ -1.55
EPHA3-202ENST00000452448 RNF17Q9BXT8 1623 aaKnown RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 KDM2BQ8NHM5 1336 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PIK3C2GO75747 1445 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 SFI1A8K8P3 1242 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 RSPH10B2B2RC85 870 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 ALG1L2C9J202 215 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 WASLO00401 505 aaPredicted RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 ASMTLO95671 621 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 POP4O95707 220 aaKnown RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 ATP5BP06576 529 aaKnown RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 LINGO3P0C6S8 592 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 RSPH10BP0C881 870 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 HOXC12P31275 282 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 RAD52P43351 418 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PSMC4P43686 418 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 CBX5P45973 191 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 CTCFP49711 727 aaPredicted RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 RALGDSQ12967 914 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PPA1Q15181 289 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 SNCBQ16143 134 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 CCDC183Q5T5S1 534 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 GRAMD4Q6IC98 578 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PTCRAQ6ISU1 281 aaPredicted RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 ARHGAP11AQ6P4F7 1023 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 ABRAXAS1Q6UWZ7 409 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 STRA8Q7Z7C7 330 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 HID1Q8IV36 788 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PNMA1Q8ND90 353 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 KLHDC4Q8TBB5 520 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 SGK3Q96BR1 496 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 CRBNQ96SW2 442 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 TSG101Q99816 390 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 LPIN3Q9BQK8 851 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 RIOK1Q9BRS2 568 aaKnown RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 HERPUD2Q9BSE4 406 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 APOL5Q9BWW9 433 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 TRIM5Q9C035 493 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 CEP44Q9C0F1 390 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 CDH19Q9H159 772 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 BRD9Q9H8M2 597 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PARVBQ9HBI1 364 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 SDHAF3Q9NRP4 125 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 ANKEF1Q9NU02 776 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 EHD2Q9NZN4 543 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 CIDEBQ9UHD4 219 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 SH3BGRL2Q9UJC5 107 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 PTBP2Q9UKA9 531 aaKnown RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 HPS5Q9UPZ3 1129 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 ATP6V1DQ9Y5K8 247 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 ZBBXA8MT70 800 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 CACNB4O00305 520 aaPredicted RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 KRIT1O00522 736 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 HOXC11O43248 304 aaPredicted RBP5.36□□□□□ -1.55
EPHA3-202ENST00000452448 DGKIO75912 1065 aa5.36□□□□□ -1.55
EPHA3-202ENST00000452448 DDX58O95786 925 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms