RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ARHGEF26Q96DR7 871 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 PDCD2LQ9BRP1 358 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 EDEM3Q9BZQ6 932 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 RNF146Q9NTX7 359 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 PPP1R9AQ9ULJ8 1098 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 FRMD4BQ9Y2L6 1034 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 VWA5AO00534 786 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 ATMINO43313 823 aaPredicted RBP16.12■□□□□ 0.17
SF1-211ENST00000448404 SYF2O95926 243 aaKnown RBP16.12■□□□□ 0.17
SF1-211ENST00000448404 ITGA4P13612 1032 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 GALCP54803 685 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 TTC19Q6DKK2 380 aaPredicted RBP16.12■□□□□ 0.17
SF1-211ENST00000448404 AADACL2Q6P093 401 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 FOXR2Q6PJQ5 311 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 SYN2Q92777 582 aaPredicted RBP16.12■□□□□ 0.17
SF1-211ENST00000448404 IQCDQ96DY2 449 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 NFU1Q9UMS0 254 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 ZC3H4Q9UPT8 1303 aaKnown RBP16.12■□□□□ 0.17
SF1-211ENST00000448404 WDR46O15213 610 aaKnown RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 CEP104O60308 925 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 P4HBP07237 508 aaKnown RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 ADRB2P07550 413 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 QARSP47897 775 aaKnown RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 MYL7Q01449 175 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 GUCY2DQ02846 1103 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 ZNF526Q8TF50 670 aaPredicted RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 PLCB1Q9NQ66 1216 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 NR2E1Q9Y466 385 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 UBIAD1Q9Y5Z9 338 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 COL2A1P02458 1487 aaPredicted RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 TCP1P17987 556 aaKnown RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 SETQ01105 290 aaPredicted RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 MEI1Q5TIA1 1274 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 C8orf74Q6P047 294 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 ANO5Q75V66 913 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 HAUS6Q7Z4H7 955 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 PHLDB2Q86SQ0 1253 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 MTMR14Q8NCE2 650 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 KIAA1683Q9H0B3 1180 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 EPB41L5Q9HCM4 733 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 UBE2TQ9NPD8 197 aaPredicted RBP16.11■□□□□ 0.17
SF1-211ENST00000448404 TCEAL9Q9UHQ7 104 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 RPTORQ8N122 1335 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 MYH11P35749 1972 aa16.11■□□□□ 0.17
SF1-211ENST00000448404 AGPSO00116 658 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 ATP8B1O43520 1251 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 ZNF862O60290 1169 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 RGS20O76081 388 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 MAP2K1Q02750 393 aaPredicted RBP16.1■□□□□ 0.17
SF1-211ENST00000448404 BFSP1Q12934 665 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 C1orf220Q5T0J3 134 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 FKBP1CQ5VVH2 108 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 FOXR1Q6PIV2 292 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 RIT2Q99578 217 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 METTL14Q9HCE5 456 aaKnown RBP16.1■□□□□ 0.17
SF1-211ENST00000448404 PXMP2Q9NR77 195 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
SF1-211ENST00000448404 EIF3DO15371 548 aaKnown RBP eCLIP16.1■□□□□ 0.17
SF1-211ENST00000448404 RNF40O75150 1001 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 PPP1R37O75864 691 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 SSTR3P32745 418 aaPredicted RBP16.1■□□□□ 0.17
SF1-211ENST00000448404 ZNF211Q13398 564 aaPredicted RBP16.1■□□□□ 0.17
SF1-211ENST00000448404 EPC2Q52LR7 807 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 DMAC2Q9NW81 257 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 PCDHGC5Q9Y5F6 944 aa16.1■□□□□ 0.17
SF1-211ENST00000448404 TMEM110-MUSTN1A8MSY1 372 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 SLC16A3O15427 465 aaKnown RBP16.09■□□□□ 0.17
SF1-211ENST00000448404 ADSSP30520 456 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 MAP3K10Q02779 954 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 SCARA3Q6AZY7 606 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 DAAM2Q86T65 1068 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 INPP4AQ96PE3 977 aaPredicted RBP16.09■□□□□ 0.17
SF1-211ENST00000448404 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 DDX47Q9H0S4 455 aaKnown RBP16.09■□□□□ 0.17
SF1-211ENST00000448404 THAP2Q9H0W7 228 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 NUCKS1Q9H1E3 243 aaKnown RBP16.09■□□□□ 0.17
SF1-211ENST00000448404 HSPBP1Q9NZL4 362 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 GABBR1Q9UBS5 961 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 HEXIM1O94992 359 aaKnown RBP16.09■□□□□ 0.17
SF1-211ENST00000448404 GUCY2CP25092 1073 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 SOX5P35711 763 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 STAT1P42224 750 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 PCNX4Q63HM2 1172 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 METTL13Q8N6R0 699 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 DHX38Q92620 1227 aaKnown RBP16.09■□□□□ 0.17
SF1-211ENST00000448404 ADGRA3Q8IWK6 1321 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 RAD51CO43502 376 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 PRPF4BQ13523 1007 aaKnown RBP16.09■□□□□ 0.17
SF1-211ENST00000448404 TMEM132BQ14DG7 1078 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 C2CD6Q53TS8 623 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 SWSAP1Q6NVH7 229 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 EEPD1Q7L9B9 569 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 MMGT1Q8N4V1 131 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms