RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 FAM133AQ8N9E0 248 aa6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 DAGLBQ8NCG7 672 aa6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 LSM14AQ8ND56 463 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 USP6NLQ92738 828 aa6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 MAML3Q96JK9 1138 aa6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 PXMP2Q9NR77 195 aa6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 TMEM260Q9NX78 707 aa6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 ZHX1Q9UKY1 873 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 NOL7Q9UMY1 257 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 PTCH2Q9Y6C5 1203 aa6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 PLXNB2O15031 1838 aa6.96□□□□□ -1.3
ECHDC1-208ENST00000436638 BICDL2A1A5D9 508 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 PIK3R2O00459 728 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 CBFA2T2O43439 604 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 STAM2O75886 525 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 HMGCRP04035 888 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 RARAP10276 462 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 ELNP15502 786 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 CNGA1P29973 690 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 DGKGP49619 791 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 BIRC2Q13490 618 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 PGM5Q15124 567 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 CCL14Q16627 93 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 GNPTABQ3T906 1256 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 XRRA1Q6P2D8 792 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 PIK3AP1Q6ZUJ8 805 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 EEPD1Q7L9B9 569 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 FBXO18Q8NFZ0 1043 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 RASGRP4Q8TDF6 673 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 TRIB2Q92519 343 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 PGBD1Q96JS3 809 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 NAP1L4Q99733 375 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 PDCD2LQ9BRP1 358 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 TINF2Q9BSI4 451 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 RSPH9Q9H1X1 276 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 FOXP1Q9H334 677 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 GJB4Q9NTQ9 266 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 DNAJB12Q9NXW2 375 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 COL20A1Q9P218 1284 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 MGAMO43451 1857 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 SYNGAP1Q96PV0 1343 aa6.95□□□□□ -1.3
ECHDC1-208ENST00000436638 BTBD18B2RXH4 712 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 M0R082 166 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 GNB5O14775 395 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ZBTB39O15060 712 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 STX6O43752 255 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ATP2B1P20020 1258 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 CYP2C19P33261 490 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 SREBF1P36956 1147 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 PSMC1P62191 440 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ARHGAP4P98171 946 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 CAP1Q01518 475 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 PCNX4Q63HM2 1172 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 KCNV1Q6PIU1 500 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 MAMDC4Q6UXC1 1216 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 SEPT14Q6ZU15 432 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 NEK8Q86SG6 692 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 C1orf131Q8NDD1 294 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ZNF417Q8TAU3 575 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 TBCKQ8TEA7 893 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 SH3TC2Q8TF17 1288 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 PIK3R5Q8WYR1 880 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ITFG2Q969R8 447 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ZNF587Q96SQ5 575 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 MDFIQ99750 246 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ABHD16BQ9H3Z7 469 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 SUV39H2Q9H5I1 410 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 VTA1Q9NP79 307 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 C11orf16Q9NQ32 467 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 FAM13BQ9NYF5 915 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 RTEL1Q9NZ71 1219 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ZFATQ9P243 1243 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 TCEAL9Q9UHQ7 104 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 FAM184BQ9ULE4 1060 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 SLC6A14Q9UN76 642 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 CASP8AP2Q9UKL3 1982 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 ZNF236Q9UL36 1845 aa6.94□□□□□ -1.3
ECHDC1-208ENST00000436638 RBBP6Q7Z6E9 1792 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 ZSWIM8A7E2V4 1837 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 CCDC189A1A4V9 331 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 MSCO60682 206 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 SNAI1O95863 264 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 AKR1A1P14550 325 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 GCFC2P16383 781 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 SYT1P21579 422 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 EDNRBP24530 442 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 USP11P51784 963 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 CACNB2Q08289 660 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 ACVR2BQ13705 512 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 TTLL4Q14679 1199 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 INF2Q27J81 1249 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 LETM2Q2VYF4 491 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 PRAMEF19Q5SWL8 479 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 VSIG10LQ86VR7 867 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 PLA2G4DQ86XP0 818 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 FBXO16Q8IX29 292 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 SHISA4Q96DD7 197 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 CDHR1Q96JP9 859 aa6.93□□□□□ -1.3
ECHDC1-208ENST00000436638 FGD4Q96M96 766 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms