RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 TMEM143Q96AN5 459 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 MTMR9Q96QG7 549 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 MTRQ99707 1265 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 UBE2ZQ9H832 354 aaPredicted RBP19.63■□□□□ 0.73
NUP50-208ENST00000430547 ALG13Q9NP73 1137 aaKnown RBP19.63■□□□□ 0.73
NUP50-208ENST00000430547 CHST12Q9NRB3 414 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 XIRP2A4UGR9 3374 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 MYO7AQ13402 2215 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 POTEMA6NI47 508 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 TCEAL5Q5H9L2 206 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 TTC38Q5R3I4 469 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 TWF2Q6IBS0 349 aaKnown RBP19.62■□□□□ 0.73
NUP50-208ENST00000430547 EP400NLQ6ZTU2 488 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 CATSPER4Q7RTX7 472 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 ECHDC2Q86YB7 292 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 KSR1Q8IVT5 923 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 UHRF1Q96T88 793 aaPredicted RBP19.62■□□□□ 0.73
NUP50-208ENST00000430547 TMEM117Q9H0C3 514 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 TMEM60Q9H2L4 133 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 PLAGL2Q9UPG8 496 aa19.62■□□□□ 0.73
NUP50-208ENST00000430547 PIN4Q9Y237 131 aaKnown RBP19.62■□□□□ 0.73
NUP50-208ENST00000430547 LYPLA2O95372 231 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 OR52Z1P0C646 297 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 SRGAP2CP0DJJ0 459 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 TRAPPC10P48553 1259 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 ZNF174Q15697 407 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 CSPP1Q1MSJ5 1256 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 KLHL23Q8NBE8 558 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 ERMNQ8TAM6 284 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 PRPF31Q8WWY3 499 aaKnown RBP19.61■□□□□ 0.73
NUP50-208ENST00000430547 PPP2R3CQ969Q6 453 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 HSD17B14Q9BPX1 270 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 ANKEF1Q9NU02 776 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 TTC28Q96AY4 2481 aa19.61■□□□□ 0.73
NUP50-208ENST00000430547 A0A0U1RQF3 1178 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 ZBTB39O15060 712 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 ASAP2O43150 1006 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 EOMESO95936 686 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 ITGB1P05556 798 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 SKIP12755 728 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 BMP1P13497 986 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 LAG3P18627 525 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 KCNA5P22460 613 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 MCM2P49736 904 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 LAMTOR4Q0VGL1 99 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 LRRC43Q8N309 656 aa19.6■□□□□ 0.73
NUP50-208ENST00000430547 TYW1Q9NV66 732 aaKnown RBP19.6■□□□□ 0.73
NUP50-208ENST00000430547 TNFRSF10AO00220 468 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 NCK2O43639 380 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 DGAT1O75907 488 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 TECP42680 631 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 MXD4Q14582 209 aaPredicted RBP19.59■□□□□ 0.73
NUP50-208ENST00000430547 SRGAP1Q7Z6B7 1085 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 FERMT3Q86UX7 667 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 THNSL1Q8IYQ7 743 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 RNF149Q8NC42 400 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 POF1BQ8WVV4 589 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 IFT122Q9HBG6 1241 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 TUFT1Q9NNX1 390 aa19.59■□□□□ 0.73
NUP50-208ENST00000430547 SPTBN5Q9NRC6 3674 aaKnown RBP19.59■□□□□ 0.73
NUP50-208ENST00000430547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.58■□□□□ 0.72
NUP50-208ENST00000430547 PHKA2P46019 1235 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 RAB27AP51159 221 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 TFDP1Q14186 410 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 COLGALT1Q8NBJ5 622 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 SPPL3Q8TCT6 385 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 PIGOQ8TEQ8 1089 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 PABPC5Q96DU9 382 aaKnown RBP19.58■□□□□ 0.72
NUP50-208ENST00000430547 TMX3Q96JJ7 454 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 TBC1D32Q96NH3 1257 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 CASD1Q96PB1 797 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 MRPL9Q9BYD2 267 aaKnown RBP19.58■□□□□ 0.72
NUP50-208ENST00000430547 CLDND1Q9NY35 253 aa19.58■□□□□ 0.72
NUP50-208ENST00000430547 NCOR1O75376 2440 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 ERLIN2O94905 339 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 U2AF2P26368 475 aaKnown RBP eCLIP19.57■□□□□ 0.72
NUP50-208ENST00000430547 RARRES1P49788 294 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 UBE3AQ05086 875 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 HAUS3Q68CZ6 603 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 HELQQ8TDG4 1101 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 TRAIPQ9BWF2 469 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 AGPAT5Q9NUQ2 364 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 HCSTQ9UBK5 93 aa19.57■□□□□ 0.72
NUP50-208ENST00000430547 H3BQV1 296 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 USO1O60763 962 aaKnown RBP19.56■□□□□ 0.72
NUP50-208ENST00000430547 FGF18O76093 207 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 XRCC6P12956 609 aaKnown RBP eCLIP19.56■□□□□ 0.72
NUP50-208ENST00000430547 PPM1AP35813 382 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 LEXMQ3ZCV2 418 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 CLLU1OSQ5K130 101 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 ZNF598Q86UK7 904 aaKnown RBP19.56■□□□□ 0.72
NUP50-208ENST00000430547 CATSPER3Q86XQ3 398 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 MICAL1Q8TDZ2 1067 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 RSPH1Q8WYR4 309 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 ZNF558Q96NG5 402 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 NACC1Q96RE7 527 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 POLR3CQ9BUI4 534 aaPredicted RBP19.56■□□□□ 0.72
NUP50-208ENST00000430547 RAB34Q9BZG1 259 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 IGFLR1Q9H665 355 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms