RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 GTF3C6Q969F1 213 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 FAM20AQ96MK3 541 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 IFT122Q9HBG6 1241 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 CYP26B1Q9NR63 512 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 BARX2Q9UMQ3 279 aaPredicted RBP19.19■□□□□ 0.66
CPSF4-203ENST00000430038 QARSP47897 775 aaKnown RBP19.18■□□□□ 0.66
CPSF4-203ENST00000430038 KCNC3Q14003 757 aa19.18■□□□□ 0.66
CPSF4-203ENST00000430038 ADHFE1Q8IWW8 467 aa19.18■□□□□ 0.66
CPSF4-203ENST00000430038 THNSL1Q8IYQ7 743 aa19.18■□□□□ 0.66
CPSF4-203ENST00000430038 HELQQ8TDG4 1101 aa19.18■□□□□ 0.66
CPSF4-203ENST00000430038 LPPQ93052 612 aa19.18■□□□□ 0.66
CPSF4-203ENST00000430038 MINDY3Q9H8M7 445 aa19.18■□□□□ 0.66
CPSF4-203ENST00000430038 TLR9Q9NR96 1032 aa19.18■□□□□ 0.66
CPSF4-203ENST00000430038 BMP2KQ9NSY1 1161 aaPredicted RBP19.18■□□□□ 0.66
CPSF4-203ENST00000430038 CD207Q9UJ71 328 aa19.18■□□□□ 0.66
CPSF4-203ENST00000430038 HIDE1A8MVS5 230 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 BTBD18B2RXH4 712 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 EYA4O95677 639 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 NDUFV1P49821 464 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 FOSBP53539 338 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 TMEM31Q5JXX7 168 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 KCNT2Q6UVM3 1135 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 MICAL1Q8TDZ2 1067 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 TMEM143Q96AN5 459 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 DYDC2Q96IM9 177 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 SCLT1Q96NL6 688 aa19.17■□□□□ 0.66
CPSF4-203ENST00000430038 GCOM2Q9BZD3 368 aaPredicted RBP19.17■□□□□ 0.66
CPSF4-203ENST00000430038 A0A087WWV3 80 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 NT5C1B-RDH14C9J2C7 533 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 B4GALT3O60512 393 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 SLITRK3O94933 977 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 P4HBP07237 508 aaKnown RBP19.16■□□□□ 0.66
CPSF4-203ENST00000430038 GCFC2P16383 781 aaKnown RBP19.16■□□□□ 0.66
CPSF4-203ENST00000430038 PHKA2P46019 1235 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 NEK4P51957 841 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 PLCB3Q01970 1234 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 UBE3AQ05086 875 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 SMAD4Q13485 552 aaKnown RBP19.16■□□□□ 0.66
CPSF4-203ENST00000430038 CTTNQ14247 550 aaKnown RBP19.16■□□□□ 0.66
CPSF4-203ENST00000430038 EPHA7Q15375 998 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 ZNF710Q8N1W2 664 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 SMRP1Q8NCR6 262 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 PRPF31Q8WWY3 499 aaKnown RBP19.16■□□□□ 0.66
CPSF4-203ENST00000430038 MRPS27Q92552 414 aaKnown RBP19.16■□□□□ 0.66
CPSF4-203ENST00000430038 NLRP4Q96MN2 994 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 DHX33Q9H6R0 707 aaKnown RBP19.16■□□□□ 0.66
CPSF4-203ENST00000430038 TLE6Q9H808 572 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 AAASQ9NRG9 546 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 PRKAG3Q9UGI9 489 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 TECTAO75443 2155 aa19.16■□□□□ 0.66
CPSF4-203ENST00000430038 TBX3O15119 743 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 EOMESO95936 686 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 LAG3P18627 525 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 AFF1P51825 1210 aaKnown RBP19.15■□□□□ 0.66
CPSF4-203ENST00000430038 CYP4A11Q02928 519 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 COASYQ13057 564 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 ANKRD1Q15327 319 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 DUSP6Q16828 381 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 PLPP4Q5VZY2 271 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 NCAPH2Q6IBW4 605 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 TMEM173Q86WV6 379 aaPredicted RBP19.15■□□□□ 0.66
CPSF4-203ENST00000430038 C4orf19Q8IY42 314 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 CEP170P1Q96L14 293 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 LXNQ9BS40 222 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 TRAIPQ9BWF2 469 aa19.15■□□□□ 0.66
CPSF4-203ENST00000430038 HOXA11P31270 313 aaPredicted RBP19.14■□□□□ 0.65
CPSF4-203ENST00000430038 KRT2P35908 639 aa19.14■□□□□ 0.65
CPSF4-203ENST00000430038 ZNF410Q86VK4 478 aa19.14■□□□□ 0.65
CPSF4-203ENST00000430038 SLC39A11Q8N1S5 342 aa19.14■□□□□ 0.65
CPSF4-203ENST00000430038 BCL7CQ8WUZ0 217 aaPredicted RBP19.14■□□□□ 0.65
CPSF4-203ENST00000430038 XPNPEP1Q9NQW7 623 aa19.14■□□□□ 0.65
CPSF4-203ENST00000430038 CHST12Q9NRB3 414 aa19.14■□□□□ 0.65
CPSF4-203ENST00000430038 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.65
CPSF4-203ENST00000430038 CDH22Q9UJ99 828 aa19.14■□□□□ 0.65
CPSF4-203ENST00000430038 LZTS1Q9Y250 596 aa19.14■□□□□ 0.65
CPSF4-203ENST00000430038 SRGAP2CP0DJJ0 459 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 XBP1P17861 261 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 YWHABP31946 246 aaKnown RBP19.13■□□□□ 0.65
CPSF4-203ENST00000430038 DNM2P50570 870 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 UBXN11Q5T124 520 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 ERICH6BQ5W0A0 696 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 LRRC43Q8N309 656 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 FEZF2Q8TBJ5 459 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 ZNF558Q96NG5 402 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 HSD17B14Q9BPX1 270 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 TCF25Q9BQ70 676 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 S1PR5Q9H228 398 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 PIN4Q9Y237 131 aaKnown RBP19.13■□□□□ 0.65
CPSF4-203ENST00000430038 USP15Q9Y4E8 981 aaPredicted RBP19.13■□□□□ 0.65
CPSF4-203ENST00000430038 COL4A3BPQ9Y5P4 624 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 MYO10Q9HD67 2058 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 WDFY4Q6ZS81 3184 aa19.13■□□□□ 0.65
CPSF4-203ENST00000430038 HOXA2O43364 376 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 OFD1O75665 1012 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 BCAR1P56945 870 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 CDC42EP1Q00587 391 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 LAMTOR4Q0VGL1 99 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 AGMOQ6ZNB7 445 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 CATSPER4Q7RTX7 472 aa19.12■□□□□ 0.65
CPSF4-203ENST00000430038 TPH2Q8IWU9 490 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms