RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 PCDHB7Q9Y5E2 793 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 FNDC1Q4ZHG4 1894 aaPredicted RBP20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 MYO7AQ13402 2215 aa20.19■□□□□ 0.82
SSR4P1-202ENST00000429427 FXR2P51116 673 aaKnown RBP eCLIP20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 CDC42EP1Q00587 391 aa20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 FERMT3Q86UX7 667 aa20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 ECHDC2Q86YB7 292 aa20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 PSPC1Q8WXF1 523 aaKnown RBP20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 MRPL38Q96DV4 380 aaKnown RBP20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 ELAC1Q9H777 363 aaKnown RBP20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 TUFT1Q9NNX1 390 aa20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 LRFN2Q9ULH4 789 aa20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 KIF3AQ9Y496 699 aa20.18■□□□□ 0.82
SSR4P1-202ENST00000429427 GRM6O15303 877 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 SRGAP2CP0DJJ0 459 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 RPA1P27694 616 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 TFF2Q03403 129 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 CAMK1Q14012 370 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 CLLU1OSQ5K130 101 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 MCTP1Q6DN14 999 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 IGSF22Q8N9C0 903 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 MTRQ99707 1265 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 COL25A1Q9BXS0 654 aaPredicted RBP20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 THEGQ9P2T0 379 aa20.17■□□□□ 0.82
SSR4P1-202ENST00000429427 A0A0U1RQF3 1178 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 TBKBP1A7MCY6 615 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 PP2D1A8MPX8 630 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 GAS2O43903 313 aaKnown RBP20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 DGAT1O75907 488 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 SFPQP23246 707 aaKnown RBP eCLIP20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 DNAJB1P25685 340 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 ARL2P36404 184 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 LRRC55Q6ZSA7 311 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 EXOC8Q8IYI6 725 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 CASD1Q96PB1 797 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 ATP6V0A4Q9HBG4 840 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 GPRC5CQ9NQ84 441 aa20.16■□□□□ 0.82
SSR4P1-202ENST00000429427 USO1O60763 962 aaKnown RBP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 RB1P06400 928 aa20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 XRCC6P12956 609 aaKnown RBP eCLIP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 ZSCAN20P17040 1043 aaPredicted RBP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 HOXA11P31270 313 aaPredicted RBP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 CAPSQ13938 189 aa20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 RNF149Q8NC42 400 aa20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 TCP11Q8WWU5 503 aa20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 C11orf84Q9BUA3 381 aaPredicted RBP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 TRAIPQ9BWF2 469 aa20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 CWH43Q9H720 699 aa20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 ALG13Q9NP73 1137 aaKnown RBP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 CHST12Q9NRB3 414 aa20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 AGPAT5Q9NUQ2 364 aa20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 DBR1Q9UK59 544 aaKnown RBP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 PIN4Q9Y237 131 aaKnown RBP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.15■□□□□ 0.82
SSR4P1-202ENST00000429427 MEIS3P2A8K0S8 358 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 H3BQV1 296 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 ITGB1P05556 798 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 GLRA2P23416 452 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 PHKA2P46019 1235 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 SKIV2LQ15477 1246 aaKnown RBP20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 LARP1BQ659C4 914 aaKnown RBP20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 CATSPER4Q7RTX7 472 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 KLHL23Q8NBE8 558 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 MMTAG2Q9BU76 263 aaKnown RBP20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 PLVAPQ9BX97 442 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 TYW1Q9NV66 732 aaKnown RBP20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 LRWD1Q9UFC0 647 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 PLAGL2Q9UPG8 496 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 RWDD3Q9Y3V2 267 aa20.14■□□□□ 0.81
SSR4P1-202ENST00000429427 DLL1O00548 723 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 CDC25AP30304 524 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 PRPHP41219 470 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 PTENP60484 403 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 ATP2C1P98194 919 aaPredicted RBP20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 AMHR2Q16671 573 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 RILPL1Q5EBL4 403 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 UBXN11Q5T124 520 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 SRGAP1Q7Z6B7 1085 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 IFNLR1Q8IU57 520 aaPredicted RBP20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 RNF169Q8NCN4 708 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 ERMNQ8TAM6 284 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 ATXN2LQ8WWM7 1075 aaKnown RBP20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 LPPQ93052 612 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 P2RX5Q93086 422 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 ASB2Q96Q27 587 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 NACC1Q96RE7 527 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 INO80BQ9C086 356 aaPredicted RBP20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 TMEM117Q9H0C3 514 aa20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 POLR3FQ9H1D9 316 aaPredicted RBP20.13■□□□□ 0.81
SSR4P1-202ENST00000429427 BDP1A6H8Y1 2624 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 ASAP2O43150 1006 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 CCT6AP40227 531 aaKnown RBP20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 MBTD1Q05BQ5 628 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 PDIA5Q14554 519 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 TCEAL5Q5H9L2 206 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 TWF2Q6IBS0 349 aaKnown RBP20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 MAEAQ7L5Y9 396 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 SPPL3Q8TCT6 385 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 HELQQ8TDG4 1101 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 BSNDQ8WZ55 320 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms