RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ATP2C1P98194 919 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 ADCY1Q08828 1119 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 GRM7Q14831 915 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 ACAP1Q15027 740 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 USP39Q53GS9 565 aaKnown RBP7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 CREB3L3Q68CJ9 461 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 C16orf86Q6ZW13 317 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 Q8N1X5 172 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 ZNF808Q8N4W9 903 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 SLC16A11Q8NCK7 471 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 LPPQ93052 612 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 GFM2Q969S9 779 aaKnown RBP7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 TMEM176AQ96HP8 235 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 AGO3Q9H9G7 860 aaKnown RBP7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 TOMM22Q9NS69 142 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 IFT57Q9NWB7 429 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 KCMF1Q9P0J7 381 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 SPO11Q9Y5K1 396 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 ABCC2Q92887 1545 aa7.06□□□□□ -1.28
HMGB3P5-201ENST00000428894 PMS2P1A4D2B8 440 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 C2orf78A6NCI8 922 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 ATP2A2P16615 1042 aaKnown RBP7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 STAT3P40763 770 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 TKFCQ3LXA3 575 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 ESRP1Q6NXG1 681 aaKnown RBP7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 CNNM4Q6P4Q7 775 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 NPM2Q86SE8 214 aaKnown RBP7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 KIF18BQ86Y91 864 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 NXPE1Q8N323 547 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 RPGRQ92834 1020 aaKnown RBP7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 EXTL1Q92935 676 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 ORAI3Q9BRQ5 295 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 H2AFY2Q9P0M6 372 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 SRRDQ9UH36 339 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 RBM8AQ9Y5S9 174 aaKnown RBP7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 TNIKQ9UKE5 1360 aa7.05□□□□□ -1.28
HMGB3P5-201ENST00000428894 TTBK1Q5TCY1 1321 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 PPRC1Q5VV67 1664 aaKnown RBP7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 PLSCR1O15162 318 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 GAS7O60861 476 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 ADCY7P51828 1080 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 BCAR1P56945 870 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 RIN1Q13671 783 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 MYBPC3Q14896 1274 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 RNF207Q6ZRF8 634 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 LRRTM3Q86VH5 581 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 D2HGDHQ8N465 521 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 RABGGTAQ92696 567 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 GCDHQ92947 438 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 NINJ1Q92982 152 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 SLC7A6OSQ96CW6 309 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 ZNF341Q9BYN7 854 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 MTFR1LQ9H019 292 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 SLC6A15Q9H2J7 730 aa7.04□□□□□ -1.28
HMGB3P5-201ENST00000428894 APOL3O95236 402 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 F2P00734 622 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 GDF5P43026 501 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 HHEXQ03014 270 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 FOXE3Q13461 319 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 TIGD7Q6NT04 549 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 BMP8AQ7Z5Y6 402 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 ADGRE4PQ86SQ3 457 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 SGMS1Q86VZ5 419 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 PHYKPLQ8IUZ5 450 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 DHX37Q8IY37 1157 aaKnown RBP7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 RTF1Q92541 710 aaKnown RBP7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 NKD2Q969F2 451 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 DYDC2Q96IM9 177 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 RPL10LQ96L21 214 aaKnown RBP7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 SCAND2PQ9GZW5 306 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 TLR9Q9NR96 1032 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 UHRF1BP1LA0JNW5 1464 aa7.03□□□□□ -1.28
HMGB3P5-201ENST00000428894 A0A1W2PRX2 142 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 FAM83GA6ND36 823 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 GOLGA8BA8MQT2 603 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 ZNF891A8MT65 544 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 FZD7O75084 574 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 PRPF6O94906 941 aaKnown RBP7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 POU3F2P20265 443 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 HIBADHP31937 336 aaKnown RBP7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 BPIFB4P59827 614 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 ADCY2Q08462 1091 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 SAFB2Q14151 953 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 ZZZ3Q8IYH5 903 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 C7orf31Q8N865 590 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 CHTF18Q8WVB6 975 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 WDR92Q96MX6 357 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 MYL10Q9BUA6 226 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 POLR3BQ9NW08 1133 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 DNAI1Q9UI46 699 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 CUL7Q14999 1698 aa7.02□□□□□ -1.29
HMGB3P5-201ENST00000428894 MAP3K4Q9Y6R4 1608 aa7.01□□□□□ -1.29
HMGB3P5-201ENST00000428894 CDC45O75419 566 aa7.01□□□□□ -1.29
HMGB3P5-201ENST00000428894 DSG1Q02413 1049 aa7.01□□□□□ -1.29
HMGB3P5-201ENST00000428894 TCIRG1Q13488 830 aa7.01□□□□□ -1.29
HMGB3P5-201ENST00000428894 PCBP1Q15365 356 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGB3P5-201ENST00000428894 USP51Q70EK9 711 aa7.01□□□□□ -1.29
HMGB3P5-201ENST00000428894 KANSL1Q7Z3B3 1105 aa7.01□□□□□ -1.29
HMGB3P5-201ENST00000428894 PASD1Q8IV76 773 aa7.01□□□□□ -1.29
HMGB3P5-201ENST00000428894 C1orf210Q8IVY1 113 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms