RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PCDHB12Q9Y5F1 795 aa20.67■□□□□ 0.9
NUP50-207ENST00000424634 PCDHGC5Q9Y5F6 944 aa20.67■□□□□ 0.9
NUP50-207ENST00000424634 LINC01565O15544 149 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 ATF7P17544 494 aaPredicted RBP20.66■□□□□ 0.9
NUP50-207ENST00000424634 YWHABP31946 246 aaKnown RBP20.66■□□□□ 0.9
NUP50-207ENST00000424634 CYP4A11Q02928 519 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 CALCRLQ16602 461 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 CLLU1OSQ5K130 101 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 ZNF410Q86VK4 478 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 COLGALT1Q8NBJ5 622 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 PRPF31Q8WWY3 499 aaKnown RBP20.66■□□□□ 0.9
NUP50-207ENST00000424634 TMEM143Q96AN5 459 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 MTMR9Q96QG7 549 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 HSD17B14Q9BPX1 270 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 EIF2AK1Q9BQI3 630 aaKnown RBP20.66■□□□□ 0.9
NUP50-207ENST00000424634 JPH2Q9BR39 696 aaPredicted RBP20.66■□□□□ 0.9
NUP50-207ENST00000424634 ZSWIM4Q9H7M6 989 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 IFT122Q9HBG6 1241 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 ARID2Q68CP9 1835 aa20.66■□□□□ 0.9
NUP50-207ENST00000424634 NCK2O43639 380 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 FGF18O76093 207 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 TPH2Q8IWU9 490 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 FAM178BQ8IXR5 827 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 RNF169Q8NCN4 708 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 SLC7A3Q8WY07 619 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 KHSRPQ92945 711 aaKnown RBP eCLIP20.65■□□□□ 0.9
NUP50-207ENST00000424634 NLRP4Q96MN2 994 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 TMEM60Q9H2L4 133 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 TTC12Q9H892 705 aaPredicted RBP20.65■□□□□ 0.9
NUP50-207ENST00000424634 CHST12Q9NRB3 414 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 AAASQ9NRG9 546 aa20.65■□□□□ 0.9
NUP50-207ENST00000424634 BMP2KQ9NSY1 1161 aaPredicted RBP20.65■□□□□ 0.9
NUP50-207ENST00000424634 EOMESO95936 686 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 TXKP42681 527 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 POLGP54098 1239 aaPredicted RBP20.64■□□□□ 0.89
NUP50-207ENST00000424634 ERVFC1P60507 584 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 ADAM15Q13444 863 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 XKR9Q5GH70 373 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 OTUD6AQ7L8S5 288 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 LLPHQ9BRT6 129 aaKnown RBP20.64■□□□□ 0.89
NUP50-207ENST00000424634 DACT1Q9NYF0 836 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 PPME1Q9Y570 386 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 COL4A3BPQ9Y5P4 624 aa20.64■□□□□ 0.89
NUP50-207ENST00000424634 HOXA2O43364 376 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 NEMFO60524 1076 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 SRGAP2CP0DJJ0 459 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 ATP2B1P20020 1258 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 SFPQP23246 707 aaKnown RBP eCLIP20.63■□□□□ 0.89
NUP50-207ENST00000424634 RFC5P40937 340 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 PHKA2P46019 1235 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 LAMTOR4Q0VGL1 99 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 PUS10Q3MIT2 529 aaKnown RBP20.63■□□□□ 0.89
NUP50-207ENST00000424634 HELQQ8TDG4 1101 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 C8orf76Q96K31 380 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 ZSCAN31Q96LW9 406 aaPredicted RBP20.63■□□□□ 0.89
NUP50-207ENST00000424634 TRAIPQ9BWF2 469 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 INO80BQ9C086 356 aaPredicted RBP20.63■□□□□ 0.89
NUP50-207ENST00000424634 MINDY3Q9H8M7 445 aa20.63■□□□□ 0.89
NUP50-207ENST00000424634 A0A087WWV3 80 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 TBX10O75333 385 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 LYPLA2O95372 231 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 LAG3P18627 525 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 PBX3P40426 434 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 UBE3AQ05086 875 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 EMC2Q15006 297 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 CLUL1Q15846 466 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 KCNT2Q6UVM3 1135 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 CATSPER4Q7RTX7 472 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 RBM23Q86U06 439 aaKnown RBP20.62■□□□□ 0.89
NUP50-207ENST00000424634 EXOC8Q8IYI6 725 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 THNSL1Q8IYQ7 743 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 PSPC1Q8WXF1 523 aaKnown RBP20.62■□□□□ 0.89
NUP50-207ENST00000424634 EPHX3Q9H6B9 360 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 XPNPEP1Q9NQW7 623 aa20.62■□□□□ 0.89
NUP50-207ENST00000424634 PIN4Q9Y237 131 aaKnown RBP20.62■□□□□ 0.89
NUP50-207ENST00000424634 MEIS3P2A8K0S8 358 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 MCM7P33993 719 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 NRIP1P48552 1158 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 RBM25P49756 843 aaKnown RBP20.61■□□□□ 0.89
NUP50-207ENST00000424634 SAFBQ15424 915 aaKnown RBP eCLIP20.61■□□□□ 0.89
NUP50-207ENST00000424634 LONRF3Q496Y0 759 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 TWF2Q6IBS0 349 aaKnown RBP20.61■□□□□ 0.89
NUP50-207ENST00000424634 FERMT3Q86UX7 667 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 ABI1Q8IZP0 508 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 LRRC43Q8N309 656 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 FBXO18Q8NFZ0 1043 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 MICAL1Q8TDZ2 1067 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 LPPQ93052 612 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 TLR9Q9NR96 1032 aa20.61■□□□□ 0.89
NUP50-207ENST00000424634 POTEMA6NI47 508 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 FSCN2O14926 492 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 HOXA11P31270 313 aaPredicted RBP20.6■□□□□ 0.89
NUP50-207ENST00000424634 PLCB3Q01970 1234 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 CSPP1Q1MSJ5 1256 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 EFHBQ8N7U6 833 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 MSLNLQ96KJ4 702 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 ANKEF1Q9NU02 776 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 AGPAT5Q9NUQ2 364 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 FAM105AQ9NUU6 356 aa20.6■□□□□ 0.89
NUP50-207ENST00000424634 CLEC1BQ9P126 229 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms