RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 SYCE2Q6PIF2 218 aa17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 SLC39A11Q8N1S5 342 aa17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 MRPL43Q8N983 215 aaKnown RBP17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 KREMEN2Q8NCW0 462 aa17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 RSPH1Q8WYR4 309 aa17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 UNC45AQ9H3U1 944 aa17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 CHST12Q9NRB3 414 aa17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 DZANK1Q9NVP4 752 aa17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 SORCS3Q9UPU3 1222 aa17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 PIN4Q9Y237 131 aaKnown RBP17.52■□□□□ 0.4
SBDSP1-201ENST00000415772 C5orf42Q9H799 3197 aa17.52■□□□□ 0.39
SBDSP1-201ENST00000415772 ZNF862O60290 1169 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 AVPR2P30518 371 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 CCT2P78371 535 aaKnown RBP17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 KCNC3Q14003 757 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 GIT2Q14161 759 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 XKR3Q5GH77 459 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 RARS2Q5T160 578 aaKnown RBP17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 GLB1LQ6UWU2 654 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 UBALD2Q8IYN6 164 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 LINC01465Q8N7H1 131 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 RDM1Q8NG50 284 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 PHOX2BQ99453 314 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 JPH2Q9BR39 696 aaPredicted RBP17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 GBP3Q9H0R5 595 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 ADAM7Q9H2U9 754 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 MFSD1Q9H3U5 465 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 RNF19AQ9NV58 838 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 DBR1Q9UK59 544 aaKnown RBP17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 INPP5FQ9Y2H2 1132 aa17.51■□□□□ 0.39
SBDSP1-201ENST00000415772 C2orf71A6NGG8 1288 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 DDX11L8A8MPP1 907 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 CPLX1O14810 134 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 ADAMTS3O15072 1205 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 ST18O60284 1047 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 CSDE1O75534 798 aaKnown RBP17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 SSRP1Q08945 709 aaKnown RBP17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 UGCGQ16739 394 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 LONRF3Q496Y0 759 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 ATAT1Q5SQI0 421 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 CATSPER4Q7RTX7 472 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 RHPN2Q8IUC4 686 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 VPS52Q8N1B4 723 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 TDRD5Q8NAT2 981 aaKnown RBP17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 TBCKQ8TEA7 893 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 SLC5A5Q92911 643 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 ASIC4Q96FT7 647 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 SLKQ9H2G2 1235 aaPredicted RBP17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 SH3GLB2Q9NR46 395 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 FAM86C1Q9NVL1 165 aa17.5■□□□□ 0.39
SBDSP1-201ENST00000415772 A0A087WZ62 844 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 CLASP2O75122 1294 aaKnown RBP17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 IFNAR1P17181 557 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 PHKA2P46019 1235 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 RAB27AP51159 221 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 VCPP55072 806 aaKnown RBP17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 ZNF410Q86VK4 478 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 URGCPQ8TCY9 931 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 LENG9Q96B70 501 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 PGBD4Q96DM1 585 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 NLRP4Q96MN2 994 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 FAM193BQ96PV7 902 aaPredicted RBP17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 FDXACB1Q9BRP7 624 aaPredicted RBP17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 POMKQ9H5K3 350 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 SUCLA2Q9P2R7 463 aaPredicted RBP17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 SNX14Q9Y5W7 946 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 NID2Q14112 1375 aa17.49■□□□□ 0.39
SBDSP1-201ENST00000415772 C2CD4DB7Z1M9 353 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 MARCH6O60337 910 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 GFRA3O60609 400 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 DKC1O60832 514 aaKnown RBP eCLIP17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 TCF15Q12870 199 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 ZNF598Q86UK7 904 aaKnown RBP17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 CABP7Q86V35 215 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 SKAP1Q86WV1 359 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 GJA10Q969M2 543 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 ACSF2Q96CM8 615 aaPredicted RBP17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 PCDHA4Q9UN74 947 aa17.48■□□□□ 0.39
SBDSP1-201ENST00000415772 REC8O95072 547 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 HSPA4P34932 840 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 NUBP1P53384 320 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 POLGP54098 1239 aaPredicted RBP17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 Q4G0T1 1027 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 NOMO2Q5JPE7 1267 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 PPFIBP1Q86W92 1011 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 AUTS2Q8WXX7 1259 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 SLC7A3Q8WY07 619 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 LPPQ93052 612 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 SH2D3AQ9BRG2 576 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 EMILIN2Q9BXX0 1053 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 NIFKQ9BYG3 293 aaKnown RBP17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 ZBP1Q9H171 429 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 FAM105AQ9NUU6 356 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 STK39Q9UEW8 545 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 CDH22Q9UJ99 828 aa17.47■□□□□ 0.39
SBDSP1-201ENST00000415772 TECTAO75443 2155 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms