RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 CASP1P29466 404 aa33.88■■■■□ 3.01
CSNK1E-206ENST00000413574 AFMP43652 599 aa33.88■■■■□ 3.01
CSNK1E-206ENST00000413574 UBE2HP62256 183 aa33.88■■■■□ 3.01
CSNK1E-206ENST00000413574 MXD4Q14582 209 aaPredicted RBP33.88■■■■□ 3.01
CSNK1E-206ENST00000413574 RNF149Q8NC42 400 aa33.88■■■■□ 3.01
CSNK1E-206ENST00000413574 KIFAP3Q92845 792 aa33.88■■■■□ 3.01
CSNK1E-206ENST00000413574 CRYBB1P53674 252 aaPredicted RBP33.87■■■■□ 3.01
CSNK1E-206ENST00000413574 LPIN1Q14693 890 aa33.87■■■■□ 3.01
CSNK1E-206ENST00000413574 FBXO47Q5MNV8 452 aa33.87■■■■□ 3.01
CSNK1E-206ENST00000413574 LBHD1Q9BQE6 289 aaPredicted RBP33.87■■■■□ 3.01
CSNK1E-206ENST00000413574 ASAP2O43150 1006 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 NR1I2O75469 434 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 FAM160A1Q05DH4 1040 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 IFT122Q9HBG6 1241 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 LMBRD1Q9NUN5 540 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 ACRP10323 421 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 MAGEA10P43363 369 aaPredicted RBP33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 FPGSQ05932 587 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 DNAJC19Q96DA6 116 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 PAGE5Q96GU1 130 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 DRC1Q96MC2 740 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 TIPINQ9BVW5 301 aa33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 AGO3Q9H9G7 860 aaKnown RBP33.86■■■■□ 3.01
CSNK1E-206ENST00000413574 EPHB4P54760 987 aa33.85■■■■□ 3.01
CSNK1E-206ENST00000413574 KRBA2Q6ZNG9 492 aa33.85■■■■□ 3.01
CSNK1E-206ENST00000413574 CNNM3Q8NE01 707 aa33.85■■■■□ 3.01
CSNK1E-206ENST00000413574 BLZF1Q9H2G9 400 aa33.85■■■■□ 3.01
CSNK1E-206ENST00000413574 MAGEF1Q9HAY2 307 aa33.85■■■■□ 3.01
CSNK1E-206ENST00000413574 USP25Q9UHP3 1055 aa33.85■■■■□ 3.01
CSNK1E-206ENST00000413574 NOC2LQ9Y3T9 749 aaKnown RBP33.85■■■■□ 3.01
CSNK1E-206ENST00000413574 LRRIQ4A6NIV6 560 aa33.84■■■■□ 3.01
CSNK1E-206ENST00000413574 PEX3P56589 373 aa33.84■■■■□ 3.01
CSNK1E-206ENST00000413574 CDC42EP1Q00587 391 aa33.84■■■■□ 3.01
CSNK1E-206ENST00000413574 ZNF410Q86VK4 478 aa33.84■■■■□ 3.01
CSNK1E-206ENST00000413574 KIFC3Q9BVG8 833 aa33.84■■■■□ 3.01
CSNK1E-206ENST00000413574 ZHX3Q9H4I2 956 aa33.84■■■■□ 3.01
CSNK1E-206ENST00000413574 ODF2LQ9ULJ1 636 aa33.84■■■■□ 3.01
CSNK1E-206ENST00000413574 FGFR4P22455 802 aa33.83■■■■□ 3.01
CSNK1E-206ENST00000413574 TRIM9Q9C026 710 aa33.83■■■■□ 3.01
CSNK1E-206ENST00000413574 MINDY3Q9H8M7 445 aa33.83■■■■□ 3.01
CSNK1E-206ENST00000413574 DARSP14868 501 aaKnown RBP33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 EIF4BP23588 611 aaKnown RBP33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 CD52P31358 61 aa33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 TFDP1Q14186 410 aa33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 TCTN1Q2MV58 587 aa33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 C16orf59Q7L2K0 433 aa33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 ZNF710Q8N1W2 664 aa33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 IFT74Q96LB3 600 aa33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 GCOM2Q9BZD3 368 aaPredicted RBP33.82■■■■□ 3.01
CSNK1E-206ENST00000413574 RANBP2P49792 3224 aaKnown RBP33.82■■■■□ 3
CSNK1E-206ENST00000413574 FAM13AO94988 1023 aa33.82■■■■□ 3
CSNK1E-206ENST00000413574 CXCL10P02778 98 aa33.82■■■■□ 3
CSNK1E-206ENST00000413574 RFC2P35250 354 aa33.82■■■■□ 3
CSNK1E-206ENST00000413574 AMPD3Q01432 767 aa33.82■■■■□ 3
CSNK1E-206ENST00000413574 CUL4BQ13620 913 aa33.82■■■■□ 3
CSNK1E-206ENST00000413574 IL23AQ9NPF7 189 aa33.82■■■■□ 3
CSNK1E-206ENST00000413574 ADGRA3Q8IWK6 1321 aa33.82■■■■□ 3
CSNK1E-206ENST00000413574 PARNO95453 639 aaKnown RBP33.81■■■■□ 3
CSNK1E-206ENST00000413574 NPTX2P47972 431 aa33.81■■■■□ 3
CSNK1E-206ENST00000413574 PPIGQ13427 754 aaKnown RBP eCLIP33.81■■■■□ 32e-7■■□□□ 13.3
CSNK1E-206ENST00000413574 TSHZ1Q6ZSZ6 1077 aa33.81■■■■□ 3
CSNK1E-206ENST00000413574 C7orf25Q9BPX7 421 aa33.81■■■■□ 3
CSNK1E-206ENST00000413574 CCDC169A6NNP5 214 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 TBCAO75347 108 aaKnown RBP33.8■■■■□ 3
CSNK1E-206ENST00000413574 RPS6KA5O75582 802 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 PLS3P13797 630 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 IDEP14735 1019 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 NAMPTP43490 491 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 ZNF131P52739 623 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 PTENP60484 403 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 FAM228AQ86W67 206 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 MYCT1Q8N699 235 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 DBF4BQ8NFT6 615 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 LRRC27Q9C0I9 530 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 PADI3Q9ULW8 664 aa33.8■■■■□ 3
CSNK1E-206ENST00000413574 PRR29P0C7W0 189 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 PHKA2P46019 1235 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 DMP1Q13316 513 aaPredicted RBP33.79■■■■□ 3
CSNK1E-206ENST00000413574 PPP2R5AQ15172 486 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 PLEKHG4Q58EX7 1191 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 IFIH1Q9BYX4 1025 aaKnown RBP33.79■■■■□ 3
CSNK1E-206ENST00000413574 PARVGQ9HBI0 331 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 GOLGA6L22H0YM25 854 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 ASIC1P78348 528 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 NFX1Q12986 1120 aaKnown RBP33.79■■■■□ 3
CSNK1E-206ENST00000413574 ODR4Q5SWX8 454 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 RPUSD2Q8IZ73 545 aaKnown RBP33.79■■■■□ 3
CSNK1E-206ENST00000413574 DEPTORQ8TB45 409 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 C17orf75Q9HAS0 396 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 DACT1Q9NYF0 836 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 ST3GAL5Q9UNP4 418 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 SQORQ9Y6N5 450 aa33.79■■■■□ 3
CSNK1E-206ENST00000413574 LAMA2P24043 3122 aaKnown RBP33.78■■■■□ 3
CSNK1E-206ENST00000413574 POU5F1BQ06416 359 aa33.78■■■■□ 3
CSNK1E-206ENST00000413574 PAK2Q13177 524 aa33.78■■■■□ 3
CSNK1E-206ENST00000413574 KMT5AQ9NQR1 393 aa33.78■■■■□ 3
CSNK1E-206ENST00000413574 SLC16A4O15374 487 aa33.77■■■■□ 3
CSNK1E-206ENST00000413574 MBTD1Q05BQ5 628 aa33.77■■■■□ 3
CSNK1E-206ENST00000413574 CDCA2Q69YH5 1023 aaPredicted RBP33.77■■■■□ 3
CSNK1E-206ENST00000413574 USP38Q8NB14 1042 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms