RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 MYOCDQ8IZQ8 938 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 RNF149Q8NC42 400 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 PRPF31Q8WWY3 499 aaKnown RBP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 PSPC1Q8WXF1 523 aaKnown RBP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 BSNDQ8WZ55 320 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 AK8Q96MA6 479 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 PBX4Q9BYU1 374 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 CCSER1Q9C0I3 900 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 MINDY3Q9H8M7 445 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 IFT122Q9HBG6 1241 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 BLOC1S4Q9NUP1 217 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 ST3GAL5Q9UNP4 418 aa8.58□□□□□ -1.04
CPSF4-202ENST00000412686 YBX2Q9Y2T7 364 aaKnown RBP8.58□□□□□ -1.04
CPSF4-202ENST00000412686 COL4A6Q14031 1691 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 NPHP3-ACAD11A0A0J9YXS1 232 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 ABHD14A-ACY1A0A1B0GW23 586 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 LCHNA4D1U4 455 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 ARHGEF15O94989 841 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 UPP2O95045 317 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 YEATS4O95619 227 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 PDIA4P13667 645 aaKnown RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 DARSP14868 501 aaKnown RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 CYP11B2P19099 503 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 NCLP19338 710 aaKnown RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 MUTP22033 750 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 EIF4BP23588 611 aaKnown RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 KCNJ6P48051 423 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 DNM2P50570 870 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 RAD51AP2Q09MP3 1159 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 IKBKEQ14164 716 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 DHX8Q14562 1220 aaKnown RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 FAM102BQ5T8I3 360 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 RINT1Q6NUQ1 792 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 SHC4Q6S5L8 630 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 Q7L0L9 218 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 SPRED2Q7Z698 418 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 KRI1Q8N9T8 703 aaKnown RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 RASSF8Q8NHQ8 419 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 TCP11Q8WWU5 503 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 SLC39A7Q92504 469 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 APBB2Q92870 758 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 CDK5RAP3Q96JB5 506 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 SLC9A7Q96T83 725 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 JPH2Q9BR39 696 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 KIFC3Q9BVG8 833 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 PANK2Q9BZ23 570 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 MTIF3Q9H2K0 278 aaKnown RBP8.57□□□□□ -1.04
CPSF4-202ENST00000412686 GDPD2Q9HCC8 539 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 DNM3Q9UQ16 869 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 PPME1Q9Y570 386 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 STK24Q9Y6E0 443 aa8.57□□□□□ -1.04
CPSF4-202ENST00000412686 TRIOBPQ9H2D6 2365 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-202ENST00000412686 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-202ENST00000412686 ENPP3O14638 875 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 GPR182O15218 404 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 GAS2O43903 313 aaKnown RBP8.56□□□□□ -1.04
CPSF4-202ENST00000412686 HIP1RO75146 1068 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 PPP6R2O75170 966 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 PLA2G4BP0C869 781 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 C7P10643 843 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 ANP32AP39687 249 aaKnown RBP8.56□□□□□ -1.04
CPSF4-202ENST00000412686 SLC12A3P55017 1021 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 MAPK7Q13164 816 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 MCM6Q14566 821 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 DSC3Q14574 896 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 TPRNQ4KMQ1 711 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 AXDND1Q5T1B0 1012 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-202ENST00000412686 C1orf186Q6ZWK4 172 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 ZNF410Q86VK4 478 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 HERC6Q8IVU3 1022 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 DAW1Q8N136 415 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 PDILTQ8N807 584 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 SYT2Q8N9I0 419 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-202ENST00000412686 USP38Q8NB14 1042 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 MCPH1Q8NEM0 835 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 CALML4Q96GE6 196 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 FAM161BQ96MY7 647 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 ADAM2Q99965 735 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 GCOM2Q9BZD3 368 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-202ENST00000412686 NT5C3AQ9H0P0 336 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 NKX2-4Q9H2Z4 354 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 PCDHA7Q9UN72 937 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 USP20Q9Y2K6 914 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 SQORQ9Y6N5 450 aa8.56□□□□□ -1.04
CPSF4-202ENST00000412686 MORC2Q9Y6X9 1032 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-202ENST00000412686 ADGRA3Q8IWK6 1321 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 LRRIQ4A6NIV6 560 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 SFI1A8K8P3 1242 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 CUTAO60888 179 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 AMHP03971 560 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 EDN1P05305 212 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 CA3P07451 260 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 DNAJB2P25686 324 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 ME1P48163 572 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 GATMP50440 423 aa8.55□□□□□ -1.04
CPSF4-202ENST00000412686 PTENP60484 403 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms