RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 THNSL1Q8IYQ7 743 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 ABI1Q8IZP0 508 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 COLGALT1Q8NBJ5 622 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 NEK9Q8TD19 979 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 MICAL1Q8TDZ2 1067 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 KHSRPQ92945 711 aaKnown RBP eCLIP11.25□□□□□ -0.616e-7■■■□□ 15.3
PKP4-203ENST00000411900 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 CWH43Q9H720 699 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 ELAC1Q9H777 363 aaKnown RBP11.25□□□□□ -0.61
PKP4-203ENST00000411900 CD320Q9NPF0 282 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
PKP4-203ENST00000411900 LIMCH1Q9UPQ0 1083 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 PCDHB12Q9Y5F1 795 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 NCOR1O75376 2440 aa11.25□□□□□ -0.61
PKP4-203ENST00000411900 C5orf42Q9H799 3197 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 PER2O15055 1255 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 NEMFO60524 1076 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 DKC1O60832 514 aaKnown RBP eCLIP11.24□□□□□ -0.611e-14■□□□□ 9.4
PKP4-203ENST00000411900 FGF18O76093 207 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 SRGAP2CP0DJJ0 459 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 MCM7P33993 719 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 LTBRP36941 435 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 NAALADL2Q58DX5 795 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 XKR9Q5GH70 373 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 CLLU1OSQ5K130 101 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 TWF2Q6IBS0 349 aaKnown RBP11.24□□□□□ -0.61
PKP4-203ENST00000411900 CATSPER4Q7RTX7 472 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 C4orf19Q8IY42 314 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 SLFN12Q8IYM2 578 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 HELQQ8TDG4 1101 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 LPPQ93052 612 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 EIF2AK1Q9BQI3 630 aaKnown RBP11.24□□□□□ -0.61
PKP4-203ENST00000411900 TMEM117Q9H0C3 514 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 AAASQ9NRG9 546 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 PCDHA12Q9UN75 941 aa11.24□□□□□ -0.61
PKP4-203ENST00000411900 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
PKP4-203ENST00000411900 A0A0U1RQF3 1178 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 POTEMA6NI47 508 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 TBX10O75333 385 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 SLITRK3O94933 977 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 ATF7P17544 494 aaPredicted RBP11.23□□□□□ -0.61
PKP4-203ENST00000411900 LAG3P18627 525 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 SFPQP23246 707 aaKnown RBP eCLIP11.23□□□□□ -0.616e-7■□□□□ 10.9
PKP4-203ENST00000411900 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
PKP4-203ENST00000411900 NRIP1P48552 1158 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 NDUFV1P49821 464 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 ERVFC1P60507 584 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 EMC2Q15006 297 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 OTUD6AQ7L8S5 288 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 ZNF410Q86VK4 478 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 PRPF31Q8WWY3 499 aaKnown RBP11.23□□□□□ -0.61
PKP4-203ENST00000411900 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 JPH2Q9BR39 696 aaPredicted RBP11.23□□□□□ -0.61
PKP4-203ENST00000411900 TMEM60Q9H2L4 133 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
PKP4-203ENST00000411900 ZSWIM4Q9H7M6 989 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 TTC12Q9H892 705 aaPredicted RBP11.23□□□□□ -0.61
PKP4-203ENST00000411900 DACT1Q9NYF0 836 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 COL4A3BPQ9Y5P4 624 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 BDP1A6H8Y1 2624 aa11.23□□□□□ -0.61
PKP4-203ENST00000411900 MEIS3P2A8K0S8 358 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 NT5C1B-RDH14C9J2C7 533 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 HOXA2O43364 376 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
PKP4-203ENST00000411900 RFC5P40937 340 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 PHKA2P46019 1235 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 RBM10P98175 930 aaKnown RBP11.22□□□□□ -0.61
PKP4-203ENST00000411900 CDC42EP1Q00587 391 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 LAMTOR4Q0VGL1 99 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 COL19A1Q14993 1142 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 SAFBQ15424 915 aaKnown RBP eCLIP11.22□□□□□ -0.61
PKP4-203ENST00000411900 ZNF174Q15697 407 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 CTC1Q2NKJ3 1217 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 PLPP4Q5VZY2 271 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 KCNT2Q6UVM3 1135 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 ZNF598Q86UK7 904 aaKnown RBP11.22□□□□□ -0.61
PKP4-203ENST00000411900 FAM178BQ8IXR5 827 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 LRRC43Q8N309 656 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 FAM184AQ8NB25 1140 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 PIGOQ8TEQ8 1089 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 PSPC1Q8WXF1 523 aaKnown RBP11.22□□□□□ -0.61
PKP4-203ENST00000411900 MTRQ99707 1265 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 INO80BQ9C086 356 aaPredicted RBP11.22□□□□□ -0.61
PKP4-203ENST00000411900 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 TLR9Q9NR96 1032 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 RAPGEFL1Q9UHV5 662 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 INPP5FQ9Y2H2 1132 aa11.22□□□□□ -0.61
PKP4-203ENST00000411900 NCK2O43639 380 aa11.21□□□□□ -0.61
PKP4-203ENST00000411900 EOMESO95936 686 aa11.21□□□□□ -0.61
PKP4-203ENST00000411900 CA8P35219 290 aa11.21□□□□□ -0.61
PKP4-203ENST00000411900 ADAM15Q13444 863 aa11.21□□□□□ -0.61
PKP4-203ENST00000411900 GNL2Q13823 731 aaKnown RBP11.21□□□□□ -0.61
PKP4-203ENST00000411900 NBR1Q14596 966 aa11.21□□□□□ -0.61
PKP4-203ENST00000411900 PUS10Q3MIT2 529 aaKnown RBP11.21□□□□□ -0.61
PKP4-203ENST00000411900 FAM43BQ6ZT52 329 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms