RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.64□□□□□ -1.35
LSM5-206ENST00000409987 EVLQ9UI08 416 aaPredicted RBP6.64□□□□□ -1.35
LSM5-206ENST00000409987 SERPINB13Q9UIV8 391 aa6.64□□□□□ -1.35
LSM5-206ENST00000409987 CROTQ9UKG9 612 aa6.64□□□□□ -1.35
LSM5-206ENST00000409987 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 GOLGA6CA6NDK9 693 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 GOLGA6BA6NDN3 693 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 KNG1P01042 644 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
LSM5-206ENST00000409987 GOLGA6DP0CG33 693 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 COL6A1P12109 1028 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 VCAM1P19320 739 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 ADKP55263 362 aaKnown RBP6.63□□□□□ -1.35
LSM5-206ENST00000409987 ANTXR2P58335 489 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 DLG4P78352 724 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 SMAD4Q13485 552 aaKnown RBP6.63□□□□□ -1.35
LSM5-206ENST00000409987 GFOD2Q3B7J2 385 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 BMP8AQ7Z5Y6 402 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 PPM1NQ8N819 430 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 TTLL6Q8N841 843 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 CDYL2Q8N8U2 506 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 FBXO15Q8NCQ5 510 aaPredicted RBP6.63□□□□□ -1.35
LSM5-206ENST00000409987 ZBTB8AQ96BR9 441 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 CLIP3Q96DZ5 547 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 LRGUKQ96M69 825 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 AIFM3Q96NN9 605 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 WRNIP1Q96S55 665 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 ACE2Q9BYF1 805 aaPredicted RBP6.63□□□□□ -1.35
LSM5-206ENST00000409987 GOLGA6AQ9NYA3 693 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 MAGEL2Q9UJ55 1249 aa6.63□□□□□ -1.35
LSM5-206ENST00000409987 A0A0A6YYK5 440 aaPredicted RBP6.62□□□□□ -1.35
LSM5-206ENST00000409987 VSTM5A8MXK1 200 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 CUTAO60888 179 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 U2AF1L5P0DN76 240 aaPredicted RBP6.62□□□□□ -1.35
LSM5-206ENST00000409987 ADCY8P40145 1251 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 GPR15P49685 360 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 MLLT6P55198 1093 aaPredicted RBP6.62□□□□□ -1.35
LSM5-206ENST00000409987 U2AF1Q01081 240 aaKnown RBP eCLIP6.62□□□□□ -1.35
LSM5-206ENST00000409987 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
LSM5-206ENST00000409987 GTF2H3Q13889 308 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 DGKDQ16760 1214 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 ANO4Q32M45 955 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 WDR72Q3MJ13 1102 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 TMED8Q6PL24 325 aaPredicted RBP6.62□□□□□ -1.35
LSM5-206ENST00000409987 TMEFF1Q8IYR6 380 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 BCL6BQ8N143 479 aaPredicted RBP6.62□□□□□ -1.35
LSM5-206ENST00000409987 PMM1Q92871 262 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 FDXACB1Q9BRP7 624 aaPredicted RBP6.62□□□□□ -1.35
LSM5-206ENST00000409987 SOX7Q9BT81 388 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 PCGF6Q9BYE7 350 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 CSRNP2Q9H175 543 aa6.62□□□□□ -1.35
LSM5-206ENST00000409987 MAFGO15525 162 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 SEC24DO94855 1032 aaPredicted RBP6.61□□□□□ -1.35
LSM5-206ENST00000409987 TAL1P17542 331 aaPredicted RBP6.61□□□□□ -1.35
LSM5-206ENST00000409987 AKAP5P24588 427 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 ADRM1Q16186 407 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 MINDY4Q4G0A6 757 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 TMEM200BQ69YZ2 307 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 GRAMD4Q6IC98 578 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 B3GNT9Q6UX72 402 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 CATIPQ7Z7H3 387 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 THEMISQ8N1K5 641 aaPredicted RBP6.61□□□□□ -1.35
LSM5-206ENST00000409987 MIER2Q8N344 545 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 ZCCHC14Q8WYQ9 949 aaKnown RBP6.61□□□□□ -1.35
LSM5-206ENST00000409987 COA7Q96BR5 231 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 HIST1H2AHQ96KK5 128 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 HIST1H2AJQ99878 128 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 SLC12A5Q9H2X9 1139 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 PRDM16Q9HAZ2 1276 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 OBP2AQ9NY56 170 aa6.61□□□□□ -1.35
LSM5-206ENST00000409987 H0Y858 1186 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 CHGBP05060 677 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 MAP3K12Q12852 859 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 IFIT1BQ5T764 474 aaKnown RBP6.6□□□□□ -1.35
LSM5-206ENST00000409987 OTOP2Q7RTS6 562 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 TICAM2Q86XR7 235 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 KCNN1Q92952 543 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 DYDC2Q96IM9 177 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 GTPBP4Q9BZE4 634 aaKnown RBP6.6□□□□□ -1.35
LSM5-206ENST00000409987 NMRK2Q9NPI5 230 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 POLR3BQ9NW08 1133 aaPredicted RBP6.6□□□□□ -1.35
LSM5-206ENST00000409987 SCOCQ9UIL1 159 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 PMF1-BGLAPU3KQ54 211 aa6.6□□□□□ -1.35
LSM5-206ENST00000409987 A0A0G2JNJ9 132 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 ETV2O00321 342 aaPredicted RBP6.59□□□□□ -1.35
LSM5-206ENST00000409987 POU2F2P09086 479 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 HSPA6P17066 643 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 FXR1P51114 621 aaKnown RBP eCLIP6.59□□□□□ -1.35
LSM5-206ENST00000409987 MALLQ13021 153 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 ZNF267Q14586 743 aaPredicted RBP6.59□□□□□ -1.35
LSM5-206ENST00000409987 UAP1L1Q3KQV9 507 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 LILRA6Q6PI73 481 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 BTNL9Q6UXG8 535 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 DGKHQ86XP1 1220 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.59□□□□□ -1.35
LSM5-206ENST00000409987 PPP1R14CQ8TAE6 165 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 FNIP1Q8TF40 1166 aa6.59□□□□□ -1.35
LSM5-206ENST00000409987 FATE1Q969F0 183 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms