RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TMEM106CQ9BVX2 250 aa18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 GOLGA8IPA6NC78 632 aa18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 GOLGA8JA6NMD2 632 aa18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 CXCL11O14625 94 aa18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 TFDP2Q14188 446 aa18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 MAP7Q14244 749 aa18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 IER5Q5VY09 327 aa18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 TTC13Q8NBP0 860 aa18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 AGO2Q9UKV8 859 aaKnown RBP18.05■□□□□ 0.48
PCDHA13-202ENST00000409494 BACE1P56817 501 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 CTAGE3PQ8IX95 158 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 SFI1A8K8P3 1242 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 GOLGA8SH3BPF8 625 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 PNMA6AP0CW24 399 aaPredicted RBP18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 EPHX2P34913 555 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 TRIM9Q9C026 710 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 PLEKHA4Q9H4M7 779 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 RPA1P27694 616 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 ZNF746Q6NUN9 644 aaPredicted RBP18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 POLR3CQ9BUI4 534 aaPredicted RBP18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 IDI2Q9BXS1 227 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 CCDC188H7C350 402 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 HIP1RO75146 1068 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 MYBL1P10243 752 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 XPAP23025 273 aaPredicted RBP18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 EDRF1Q3B7T1 1238 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 ANKRD13CQ8N6S4 541 aa18.04■□□□□ 0.48
PCDHA13-202ENST00000409494 CELF2O95319 508 aaKnown RBP18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 FAM213AQ9BRX8 229 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 MOV10L1Q9BXT6 1211 aaKnown RBP18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 CAPS2Q9BXY5 557 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 PCDHA13Q9Y5I0 950 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 FCGRTP55899 365 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 SHC4Q6S5L8 630 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 FBXL16Q8N461 479 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 RBM41Q96IZ5 413 aaKnown RBP18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 ERAP1Q9NZ08 941 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 CD58P19256 250 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 ITKQ08881 620 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 CEP85LQ5SZL2 805 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 ZNF449Q6P9G9 518 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 GPC2Q8N158 579 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 RNF10Q8N5U6 811 aaKnown RBP18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 STAP1Q9ULZ2 295 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 CTNNA1P35221 906 aaKnown RBP18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 TAP1Q03518 808 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 DHX40Q8IX18 779 aaKnown RBP18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 ELMOD1Q8N336 334 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 BCAS4Q8TDM0 211 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 ADAM22Q9P0K1 906 aa18.03■□□□□ 0.48
PCDHA13-202ENST00000409494 KRT1P04264 644 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 SPDYE2Q495Y8 402 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 NDUFAF2Q8N183 169 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 ASNSD1Q9NWL6 643 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 RGS2P41220 211 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 RWDD2BP57060 319 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 ARHGAP24Q8N264 748 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 FBXL13Q8NEE6 735 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 TNIP3Q96KP6 325 aa18.02■□□□□ 0.48
PCDHA13-202ENST00000409494 CPT1AP50416 773 aa18.02■□□□□ 0.47
PCDHA13-202ENST00000409494 PLCB4Q15147 1175 aa18.02■□□□□ 0.47
PCDHA13-202ENST00000409494 MKNK1Q9BUB5 465 aa18.02■□□□□ 0.47
PCDHA13-202ENST00000409494 RBAKQ9NYW8 714 aaPredicted RBP18.02■□□□□ 0.47
PCDHA13-202ENST00000409494 PRKCBP05771 671 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 GUCY1A2P33402 732 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 COG7P83436 770 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 SGO2Q562F6 1265 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 PRMT7Q9NVM4 692 aaPredicted RBP18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 SUCLA2Q9P2R7 463 aaPredicted RBP18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 PPME1Q9Y570 386 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 EIF3DO15371 548 aaKnown RBP eCLIP18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 RHOBTB3O94955 611 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 ECEL1O95672 775 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 ACAP3Q96P50 834 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 GBA2Q9HCG7 927 aaPredicted RBP18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 ANAPC5Q9UJX4 755 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 PPP2R5DQ14738 602 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 EXOC4Q96A65 974 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 USP27XA6NNY8 438 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 KIF28PB7ZC32 967 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 RNF40O75150 1001 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 PLS3P13797 630 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 GPC5P78333 572 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 KCTD6Q8NC69 237 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 ATG4CQ96DT6 458 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 IL25Q9H293 177 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 KCNF1Q9H3M0 494 aa18.01■□□□□ 0.47
PCDHA13-202ENST00000409494 RARBP10826 455 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 TERF2Q15554 542 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 BSPRYQ5W0U4 402 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 FRMD4AQ9P2Q2 1039 aaPredicted RBP18■□□□□ 0.47
PCDHA13-202ENST00000409494 ANO9A1A5B4 782 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 SLC26A2P50443 739 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 OAZ1P54368 228 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 DGKDQ16760 1214 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 CYFIP1Q7L576 1253 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 RNF149Q8NC42 400 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 PPP2R3CQ969Q6 453 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms