RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 KIAA0391O15091 583 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 MAP3K7O43318 606 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 FAM200BP0CF97 657 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 TARSP26639 723 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SLCO1A2P46721 670 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 CD151P48509 253 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 AP1B1Q10567 949 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 TROAPQ12815 778 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SUPT20HQ8NEM7 779 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 WDR66Q8TBY9 1149 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 CALML4Q96GE6 196 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 NLRP3Q96P20 1036 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SPZ1Q9BXG8 430 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 PITPNM3Q9BZ71 974 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 LRRC27Q9C0I9 530 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SEMA4AQ9H3S1 761 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 TLE6Q9H808 572 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 PREBQ9HCU5 417 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 KCNK9Q9NPC2 374 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 DBR1Q9UK59 544 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ZNF232Q9UNY5 417 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ZNF510Q9Y2H8 683 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 AKAP11Q9UKA4 1901 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 UBR1Q8IWV7 1749 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SCN11AQ9UI33 1791 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SMAPO00193 183 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 PCP11498 1178 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 PTPN4P29074 926 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 CHRNA3P32297 505 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 FKBP3Q00688 224 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 IL9RQ01113 521 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ARID5AQ03989 594 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SLC34A1Q06495 639 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 LSAMPQ13449 338 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 HLFQ16534 295 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ALKBH5Q6P6C2 394 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 VSTM1Q6UX27 236 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ANKLE1Q8NAG6 615 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 CEP63Q96MT8 703 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 PLA2G12BQ9BX93 195 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 DENND2DQ9H6A0 471 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 LNPEPQ9UIQ6 1025 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 HAO1Q9UJM8 370 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 NAGPAQ9UK23 515 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 NUP188Q5SRE5 1749 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 PFDN1O60925 122 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ATP6V1G1O75348 118 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 EPS15P42566 896 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 PTK2Q05397 1052 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 GALNT17Q6IS24 598 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 LRRC74BQ6ZQY2 392 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 NELFCDQ8IXH7 590 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 NME8Q8N427 588 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SRBD1Q8N5C6 995 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 TTC8Q8TAM2 541 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 CTNNBL1Q8WYA6 563 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 IQCGQ9H095 443 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 KIAA1683Q9H0B3 1180 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ZNF212Q9UDV6 495 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 SNX24Q9Y343 169 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 RREB1Q92766 1687 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ENTPD5O75356 428 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 H2AFZP0C0S5 128 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 EPHB2P29323 1055 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 DEUP1Q05D60 604 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 DAB2IPQ5VWQ8 1189 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 CGB2Q6NT52 195 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 H2AFVQ71UI9 128 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 CYFIP1Q7L576 1253 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ANKRD42Q8N9B4 389 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 ZNF184Q99676 751 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 TUBB6Q9BUF5 446 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 GOLPH3Q9H4A6 298 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 DDX43Q9NXZ2 648 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 GRHL1Q9NZI5 618 aa6.28□□□□□ -1.4
R3HDM1-202ENST00000409478 CASZ1Q86V15 1759 aa6.27□□□□□ -1.4
R3HDM1-202ENST00000409478 PASKQ96RG2 1323 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 PHF2O75151 1096 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 FGFR4P22455 802 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 MARSP56192 900 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 PABPC4Q13310 644 aaKnown RBP eCLIP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 C4orf50Q6ZRC1 276 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 CCNJLQ8IV13 435 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 GDAP1Q8TB36 358 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 LRRC15Q8TF66 581 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 SLC7A6OSQ96CW6 309 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 HIC2Q96JB3 615 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 DHX36Q9H2U1 1008 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 SAR1AQ9NR31 198 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 STK17AQ9UEE5 414 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 ARMCX3Q9UH62 379 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 ACTL7BQ9Y614 415 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 TTLL1O95922 423 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 CSF1RP07333 972 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 BRAFP15056 766 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 SESN3P58005 492 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 CDR2Q01850 454 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms