RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 SPATA1Q5VX52 437 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 UNQ6494/PRO21346Q6UXR6 183 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 TC2NQ8N9U0 490 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 ATP8B4Q8TF62 1192 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 KIFC2Q96AC6 838 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 GSDMAQ96QA5 445 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 SH2D4AQ9H788 454 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 RAVER2Q9HCJ3 691 aaKnown RBP9.85□□□□□ -0.83
GPN1-202ENST00000407583 PIH1D3Q9NQM4 214 aaKnown RBP9.85□□□□□ -0.83
GPN1-202ENST00000407583 HOMER2Q9NSB8 354 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 FANCLQ9NW38 375 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 RWDD3Q9Y3V2 267 aa9.85□□□□□ -0.83
GPN1-202ENST00000407583 ERICH2A1L162 156 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 CTAGE9A4FU28 777 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 SRRM3A6NNA2 597 aaPredicted RBP9.84□□□□□ -0.83
GPN1-202ENST00000407583 BIN1O00499 593 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 ATP1A3P13637 1013 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 TRIM71Q2Q1W2 868 aaKnown RBP9.84□□□□□ -0.83
GPN1-202ENST00000407583 SOWAHCQ53LP3 525 aaPredicted RBP9.84□□□□□ -0.83
GPN1-202ENST00000407583 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 PRR23BQ6ZRT6 265 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 ZNF662Q6ZS27 426 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 RASGRP2Q7LDG7 609 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 FAM177A1Q8N128 213 aaPredicted RBP9.84□□□□□ -0.83
GPN1-202ENST00000407583 SIX5Q8N196 739 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 KDF1Q8NAX2 398 aaPredicted RBP9.84□□□□□ -0.83
GPN1-202ENST00000407583 FAM71BQ8TC56 605 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 CCDC12Q8WUD4 166 aaPredicted RBP9.84□□□□□ -0.83
GPN1-202ENST00000407583 CLP1Q92989 425 aaKnown RBP9.84□□□□□ -0.83
GPN1-202ENST00000407583 NUP88Q99567 741 aaPredicted RBP9.84□□□□□ -0.83
GPN1-202ENST00000407583 SLF1Q9BQI6 1058 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 FUT8Q9BYC5 575 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 NACAP1Q9BZK3 213 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 RMND1Q9NWS8 449 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 NFE2L3Q9Y4A8 694 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 PCDHA5Q9Y5H7 936 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 SLC12A7Q9Y666 1083 aa9.84□□□□□ -0.83
GPN1-202ENST00000407583 ADGRA3Q8IWK6 1321 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 MYH6P13533 1939 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 DMXL2Q8TDJ6 3036 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 USP17L12C9JPN9 530 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 USP17L21D6R901 530 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 ATP2A1O14983 1001 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 RAD21O60216 631 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 CLSTN1O94985 981 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 ITGB1P05556 798 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 MYL1P05976 194 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 ACTN2P35609 894 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 PNOCQ13519 176 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 NTRK3Q16288 839 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 ZSCAN26Q16670 478 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 LONRF2Q1L5Z9 754 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 PLEKHG4Q58EX7 1191 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 WDR93Q6P2C0 686 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 SYCE2Q6PIF2 218 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 MIGA1Q8NAN2 632 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 CHST13Q8NET6 341 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 SPPL3Q8TCT6 385 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 NETO1Q8TDF5 533 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 WDR11Q9BZH6 1224 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 POMKQ9H5K3 350 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 TLE6Q9H808 572 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 BRMS1Q9HCU9 246 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 VTA1Q9NP79 307 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 A1CFQ9NQ94 594 aaKnown RBP9.83□□□□□ -0.84
GPN1-202ENST00000407583 FBXO40Q9UH90 709 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 MAN1B1Q9UKM7 699 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.83□□□□□ -0.84
GPN1-202ENST00000407583 COL4A3Q01955 1670 aa9.83□□□□□ -0.84
GPN1-202ENST00000407583 NAV1Q8NEY1 1877 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 TARSL2A2RTX5 802 aaKnown RBP9.82□□□□□ -0.84
GPN1-202ENST00000407583 CTAGE15A4D2H0 777 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 IGSF3O75054 1194 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 IDH1O75874 414 aaKnown RBP9.82□□□□□ -0.84
GPN1-202ENST00000407583 CHGBP05060 677 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 CTAGE8P0CG41 777 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 CALM1P0DP23 149 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 CALM2P0DP24 149 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 CALM3P0DP25 149 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 AKR1B1P15121 316 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 PPP1R2P41236 205 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 TRAPPC10P48553 1259 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 FOSBP53539 338 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 HNRNPH2P55795 449 aaKnown RBP9.82□□□□□ -0.84
GPN1-202ENST00000407583 CKAP4Q07065 602 aaKnown RBP9.82□□□□□ -0.84
GPN1-202ENST00000407583 LONRF3Q496Y0 759 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 SPECC1Q5M775 1068 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 NFXL1Q6ZNB6 911 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 CTAGE6Q86UF2 777 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 SESTD1Q86VW0 696 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 CTAGE4Q8IX94 777 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 CCDC148Q8NFR7 591 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 POF1BQ8WVV4 589 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 NAPGQ99747 312 aaPredicted RBP9.82□□□□□ -0.84
GPN1-202ENST00000407583 PLVAPQ9BX97 442 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 RNF26Q9BY78 433 aaPredicted RBP9.82□□□□□ -0.84
GPN1-202ENST00000407583 PARD6BQ9BYG5 372 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 RASSF4Q9H2L5 321 aa9.82□□□□□ -0.84
GPN1-202ENST00000407583 RC3H2Q9HBD1 1191 aaKnown RBP9.82□□□□□ -0.84
GPN1-202ENST00000407583 ZNHIT6Q9NWK9 470 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms