RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 GLYCTKQ8IVS8 523 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 FAM76AQ8TAV0 307 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 RUFY1Q96T51 708 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 SH3GL2Q99962 352 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 SUCLA2Q9P2R7 463 aaPredicted RBP18.3■□□□□ 0.52
NUP50-203ENST00000407019 NFU1Q9UMS0 254 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 ESYT3A0FGR9 886 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 GOLGA6CA6NDK9 693 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 ZSCAN5CA6NGD5 496 aaPredicted RBP18.3■□□□□ 0.52
NUP50-203ENST00000407019 RAD51CO43502 376 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 CLSTN1O94985 981 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 GOLGA6DP0CG33 693 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 QARSP47897 775 aaKnown RBP18.3■□□□□ 0.52
NUP50-203ENST00000407019 RARRES1P49788 294 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 MTMR1Q13613 665 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 KLHL7Q8IXQ5 586 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 METTL13Q8N6R0 699 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 RDH13Q8NBN7 331 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 SYTL5Q8TDW5 730 aaPredicted RBP18.3■□□□□ 0.52
NUP50-203ENST00000407019 SCFD2Q8WU76 684 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 IFT81Q8WYA0 676 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 ACCSQ96QU6 501 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 SYT11Q9BT88 431 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 KIAA1683Q9H0B3 1180 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
NUP50-203ENST00000407019 MYOZ2Q9NPC6 264 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 GOLGA6AQ9NYA3 693 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 STXBP5LQ9Y2K9 1186 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 PGRMC1O00264 195 aaKnown RBP18.29■□□□□ 0.52
NUP50-203ENST00000407019 IVLP07476 585 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 TMEM253P0C7T8 217 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 ZBTB48P10074 688 aaPredicted RBP18.29■□□□□ 0.52
NUP50-203ENST00000407019 PLS3P13797 630 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 MRPS9P82933 396 aaKnown RBP18.29■□□□□ 0.52
NUP50-203ENST00000407019 RASA3Q14644 834 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 PTPROQ16827 1216 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 INTS8Q75QN2 995 aaKnown RBP18.29■□□□□ 0.52
NUP50-203ENST00000407019 DAAM2Q86T65 1068 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 CASKIN2Q8WXE0 1202 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 CALR3Q96L12 384 aaKnown RBP18.29■□□□□ 0.52
NUP50-203ENST00000407019 PDGFDQ9GZP0 370 aaPredicted RBP18.29■□□□□ 0.52
NUP50-203ENST00000407019 PLEKHA4Q9H4M7 779 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 SLC38A10Q9HBR0 1119 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 MAP3K20Q9NYL2 800 aaKnown RBP18.29■□□□□ 0.52
NUP50-203ENST00000407019 MYH11P35749 1972 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 LYPLA2O95372 231 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 C12orf56Q8IXR9 622 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 RFFLQ8WZ73 363 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 CCDC43Q96MW1 224 aaKnown RBP18.29■□□□□ 0.52
NUP50-203ENST00000407019 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.29■□□□□ 0.527e-6■□□□□ 9.4
NUP50-203ENST00000407019 HOMER2Q9NSB8 354 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 TBC1D22BQ9NU19 505 aa18.29■□□□□ 0.52
NUP50-203ENST00000407019 PPFIA1Q13136 1202 aa18.28■□□□□ 0.52
NUP50-203ENST00000407019 ARHGAP44Q17R89 818 aa18.28■□□□□ 0.52
NUP50-203ENST00000407019 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.28■□□□□ 0.52
NUP50-203ENST00000407019 NT5DC3Q86UY8 548 aa18.28■□□□□ 0.52
NUP50-203ENST00000407019 SAMD3Q8N6K7 520 aa18.28■□□□□ 0.52
NUP50-203ENST00000407019 TMEM174Q8WUU8 243 aa18.28■□□□□ 0.52
NUP50-203ENST00000407019 CTNNBL1Q8WYA6 563 aaPredicted RBP18.28■□□□□ 0.52
NUP50-203ENST00000407019 PCIF1Q9H4Z3 704 aa18.28■□□□□ 0.52
NUP50-203ENST00000407019 NOC2LQ9Y3T9 749 aaKnown RBP18.28■□□□□ 0.52
NUP50-203ENST00000407019 EIF2AK2P19525 551 aaKnown RBP18.27■□□□□ 0.52
NUP50-203ENST00000407019 TNFAIP3P21580 790 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 YWHABP31946 246 aaKnown RBP18.27■□□□□ 0.52
NUP50-203ENST00000407019 VAMP7P51809 220 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 CETN1Q12798 172 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 KIF22Q14807 665 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 CIAPIN1Q6FI81 312 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 PHLDB3Q6NSJ2 640 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 RASGEF1CQ8N431 466 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 MREGQ8N565 214 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 LMO3Q8TAP4 145 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 WHAMMQ8TF30 809 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 TAAR1Q96RJ0 339 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 TIPINQ9BVW5 301 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 SCAF8Q9UPN6 1271 aaKnown RBP18.27■□□□□ 0.52
NUP50-203ENST00000407019 EMSYQ7Z589 1322 aa18.27■□□□□ 0.52
NUP50-203ENST00000407019 FAM153BP0C7A2 387 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 DLG4P78352 724 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 FAM153CQ494X1 144 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 SLC35G2Q8TBE7 412 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 VTI1AQ96AJ9 217 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 HES6Q96HZ4 224 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 ZIM3Q96PE6 472 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 FAM153AQ9UHL3 310 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 AMFRQ9UKV5 643 aa18.27■□□□□ 0.51
NUP50-203ENST00000407019 CTDP1Q9Y5B0 961 aaPredicted RBP18.27■□□□□ 0.51
NUP50-203ENST00000407019 TISP43B9A030 160 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 CCDC188H7C350 402 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 P4HA2O15460 535 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 RPS6P62753 249 aaKnown RBP18.26■□□□□ 0.51
NUP50-203ENST00000407019 SPP2Q13103 211 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 TNFAIP1Q13829 316 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 PGM5Q15124 567 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 EIF1ADQ8N9N8 165 aaKnown RBP18.26■□□□□ 0.51
NUP50-203ENST00000407019 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.26■□□□□ 0.51
NUP50-203ENST00000407019 CBWD1Q9BRT8 395 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 ST6GALNAC4Q9H4F1 302 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 OSGEPQ9NPF4 335 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 GINM1Q9NU53 330 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms