RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 PRPHP41219 470 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 POLGP54098 1239 aaPredicted RBP9.33□□□□□ -0.92
BRCC3-205ENST00000399026 BECN1Q14457 450 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 LPIN1Q14693 890 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 EMC2Q15006 297 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 TARBP2Q15633 366 aaKnown RBP9.33□□□□□ -0.92
BRCC3-205ENST00000399026 ZRSR1Q15695 479 aaKnown RBP9.33□□□□□ -0.92
BRCC3-205ENST00000399026 ECM1Q16610 540 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 KIZQ2M2Z5 673 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 XKR9Q5GH70 373 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 HAUS3Q68CZ6 603 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 EFCAB12Q6NXP0 572 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 TMCO2Q7Z6W1 182 aaPredicted RBP9.33□□□□□ -0.92
BRCC3-205ENST00000399026 CATSPER3Q86XQ3 398 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 C4orf19Q8IY42 314 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 RPUSD2Q8IZ73 545 aaKnown RBP9.33□□□□□ -0.92
BRCC3-205ENST00000399026 KIAA0319LQ8IZA0 1049 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 IGSF22Q8N9C0 903 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 KRI1Q8N9T8 703 aaKnown RBP9.33□□□□□ -0.92
BRCC3-205ENST00000399026 SCLT1Q96NL6 688 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 USP28Q96RU2 1077 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 MAP7D2Q96T17 732 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 OSMRQ99650 979 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 HSD17B14Q9BPX1 270 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 NIFKQ9BYG3 293 aaKnown RBP9.33□□□□□ -0.92
BRCC3-205ENST00000399026 PRDM9Q9NQV7 894 aa9.33□□□□□ -0.92
BRCC3-205ENST00000399026 FCF1Q9Y324 198 aaKnown RBP9.33□□□□□ -0.92
BRCC3-205ENST00000399026 GRXCR1A8MXD5 290 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 GDF9O60383 454 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 USO1O60763 962 aaKnown RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 ZMYND10O75800 440 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 FGBP02675 491 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 ACTN1P12814 892 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 MARCKSP29966 332 aaPredicted RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 CD52P31358 61 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 WDR5P61964 334 aaKnown RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 DEFB103AP81534 67 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 PTPAQ15257 358 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 FAM26DQ5JW98 314 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 FBXO47Q5MNV8 452 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 CNKSR3Q6P9H4 555 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 RPAINQ86UA6 219 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 DBF4BQ8NFT6 615 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 TMEM40Q8WWA1 233 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 HERVK_113Q902F9 699 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 HLA-CQ95604 372 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 TMEM143Q96AN5 459 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 CHAMP1Q96JM3 812 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 PLIN2Q99541 437 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 MMTAG2Q9BU76 263 aaKnown RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 POLR3CQ9BUI4 534 aaPredicted RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 IFIH1Q9BYX4 1025 aaKnown RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 RAB34Q9BZG1 259 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 AGO3Q9H9G7 860 aaKnown RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 TUFT1Q9NNX1 390 aa9.32□□□□□ -0.92
BRCC3-205ENST00000399026 DDX19AQ9NUU7 478 aaKnown RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 COL4A4P53420 1690 aaPredicted RBP9.32□□□□□ -0.92
BRCC3-205ENST00000399026 IGKV6-21A0A0C4DH24 114 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 MAGEB2O15479 319 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 GPR32O75388 356 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 MAFO75444 373 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-205ENST00000399026 LYPLA2O95372 231 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 BMP15O95972 392 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 IBSPP21815 317 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-205ENST00000399026 FGFR4P22455 802 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 RPA1P27694 616 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 RARRES1P49788 294 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 FXR1P51114 621 aaKnown RBP eCLIP9.31□□□□□ -0.92
BRCC3-205ENST00000399026 GPC3P51654 580 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 NLRP11P59045 1033 aaKnown RBP9.31□□□□□ -0.92
BRCC3-205ENST00000399026 USP46P62068 366 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 PRR20EP86478 221 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 PRR20CP86479 221 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 PRR20DP86480 221 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 PRR20BP86481 221 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 PRR20AP86496 221 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 PAK2Q13177 524 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 MSS51Q4VC12 460 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 PLEKHG4Q58EX7 1191 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 SPECC1Q5M775 1068 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 RASIP1Q5U651 963 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 IER5Q5VY09 327 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 KRT79Q5XKE5 535 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 TSHZ1Q6ZSZ6 1077 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 MAEAQ7L5Y9 396 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 KCNK18Q7Z418 384 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 RHPN2Q8IUC4 686 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 KSR1Q8IVT5 923 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 LINC01599Q8WXQ3 324 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 SLC7A3Q8WY07 619 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 NLRP4Q96MN2 994 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 CLIC6Q96NY7 704 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 CELF4Q9BZC1 486 aaKnown RBP9.31□□□□□ -0.92
BRCC3-205ENST00000399026 MTIF3Q9H2K0 278 aaKnown RBP9.31□□□□□ -0.92
BRCC3-205ENST00000399026 ZSCAN16Q9H4T2 348 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-205ENST00000399026 DHX33Q9H6R0 707 aaKnown RBP9.31□□□□□ -0.92
BRCC3-205ENST00000399026 ATP6V0A4Q9HBG4 840 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 XPNPEP1Q9NQW7 623 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms