RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PALMO75781 387 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 RGS20O76081 388 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 TMEM132BQ14DG7 1078 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 ENOX2Q16206 610 aaKnown RBP9.86□□□□□ -0.83
TDP1-202ENST00000393452 UTP14CQ5TAP6 766 aaKnown RBP9.86□□□□□ -0.83
TDP1-202ENST00000393452 ALKBH5Q6P6C2 394 aaKnown RBP9.86□□□□□ -0.83
TDP1-202ENST00000393452 INTS8Q75QN2 995 aaKnown RBP9.86□□□□□ -0.83
TDP1-202ENST00000393452 MAEAQ7L5Y9 396 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 SPATA4Q8NEY3 305 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 NSUN6Q8TEA1 469 aaKnown RBP9.86□□□□□ -0.83
TDP1-202ENST00000393452 SYT11Q9BT88 431 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 GPR88Q9GZN0 384 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 RNF14Q9UBS8 474 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 INTUQ9ULD6 942 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 FZD1Q9UP38 647 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 PCDHA10Q9Y5I2 948 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 MYPNQ86TC9 1320 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 WDR90Q96KV7 1748 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 DOCK5Q9H7D0 1870 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 MYH9P35579 1960 aaKnown RBP9.86□□□□□ -0.83
TDP1-202ENST00000393452 TMEM150BA6NC51 233 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 PMM2O15305 246 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 P4HA2O15460 535 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 NCK2O43639 380 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 TRIM49P0CI25 452 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 TRIM49CP0CI26 452 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 KCNA2P16389 499 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 RFX1P22670 979 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 SOX5P35711 763 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 STAT1P42224 750 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 HIRAP54198 1017 aaPredicted RBP9.86□□□□□ -0.83
TDP1-202ENST00000393452 MYL7Q01449 175 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 DMTNQ08495 405 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 TERF2Q15554 542 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 MEI1Q5TIA1 1274 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 ANO5Q75V66 913 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 NLRX1Q86UT6 975 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 FMNL3Q8IVF7 1028 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 SLC30A5Q8TAD4 765 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 RUBCNQ92622 972 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 IWS1Q96ST2 819 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 TEX13BQ9BXU2 312 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 CYP39A1Q9NYL5 469 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 GGA3Q9NZ52 723 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 APEX2Q9UBZ4 518 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 DNAJC12Q9UKB3 198 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 AFG3L2Q9Y4W6 797 aa9.86□□□□□ -0.83
TDP1-202ENST00000393452 NFASCO94856 1347 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 GRID2IPA4D2P6 1211 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 TISP43B9A030 160 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 DDX3XO00571 662 aaKnown RBP eCLIP9.85□□□□□ -0.835e-8■■□□□ 12.6
TDP1-202ENST00000393452 EVI5O60447 810 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 STAM2O75886 525 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 STBD1O95210 358 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 NAP1L1P55209 391 aaKnown RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 NPEPPSP55786 919 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 FAM193AP78312 1265 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 PLS1Q14651 629 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 SMC1AQ14683 1233 aaKnown RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 DRAP1Q14919 205 aaPredicted RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 XKR9Q5GH70 373 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 SH3D19Q5HYK7 790 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 VPS36Q86VN1 386 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 GPC2Q8N158 579 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 HVCN1Q96D96 273 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 CCDC43Q96MW1 224 aaKnown RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 SH2D3AQ9BRG2 576 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 CBWD1Q9BRT8 395 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 NTPCRQ9BSD7 190 aaKnown RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 INTS2Q9H0H0 1204 aaKnown RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 GPRC5CQ9NQ84 441 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 A1CFQ9NQ94 594 aaKnown RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 TCEAL9Q9UHQ7 104 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 A0A0A6YYK5 440 aaPredicted RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
TDP1-202ENST00000393452 ZNF862O60290 1169 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 KRT13P13646 458 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 CXCR5P32302 372 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 PEX3P56589 373 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 C2orf54Q08AI8 447 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 C1orf220Q5T0J3 134 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 PLA2G4FQ68DD2 849 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 LRRC57Q8N9N7 239 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 XXYLT1Q8NBI6 393 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 TMEM161BQ8NDZ6 487 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.85□□□□□ -0.83
TDP1-202ENST00000393452 CDHR1Q96JP9 859 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 ACAD9Q9H845 621 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 SUGCTQ9HAC7 445 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 C17orf75Q9HAS0 396 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 HOXC10Q9NYD6 342 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 HSPBP1Q9NZL4 362 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 USP20Q9Y2K6 914 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 SBF1O95248 1867 aa9.85□□□□□ -0.83
TDP1-202ENST00000393452 SLC16A4O15374 487 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 N4BP1O75113 896 aaKnown RBP9.84□□□□□ -0.83
TDP1-202ENST00000393452 PAFAH1B1P43034 410 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 VAMP7P51809 220 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 DLG4P78352 724 aa9.84□□□□□ -0.83
TDP1-202ENST00000393452 PPP3CAQ08209 521 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms