RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 WRAP73Q9P2S5 460 aaPredicted RBP15.95■□□□□ 0.14
NELFE-201ENST00000375425 MBTPS2O43462 519 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 EIF5BO60841 1220 aaKnown RBP15.94■□□□□ 0.14
NELFE-201ENST00000375425 LAG3P18627 525 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 NDUFV1P49821 464 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 ERVFC1P60507 584 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 SMAD2Q15796 467 aaKnown RBP15.94■□□□□ 0.14
NELFE-201ENST00000375425 CLLU1OSQ5K130 101 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 ZNF598Q86UK7 904 aaKnown RBP15.94■□□□□ 0.14
NELFE-201ENST00000375425 ZNF410Q86VK4 478 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 SLFN12Q8IYM2 578 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 TNFRSF25Q93038 417 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 CEP170P1Q96L14 293 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 INO80BQ9C086 356 aaPredicted RBP15.94■□□□□ 0.14
NELFE-201ENST00000375425 TLE6Q9H808 572 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 BRMS1Q9HCU9 246 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 RGL1Q9NZL6 768 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 PRKAG3Q9UGI9 489 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 WDR81Q562E7 1941 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 PER2O15055 1255 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 JAK2O60674 1132 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 BAG4O95429 457 aaKnown RBP15.94■□□□□ 0.14
NELFE-201ENST00000375425 ATF7P17544 494 aaPredicted RBP15.94■□□□□ 0.14
NELFE-201ENST00000375425 SFPQP23246 707 aaKnown RBP eCLIP15.94■□□□□ 0.14
NELFE-201ENST00000375425 PLCB3Q01970 1234 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 ZP2Q05996 745 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 NCAPH2Q6IBW4 605 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 KCNT2Q6UVM3 1135 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 ADHFE1Q8IWW8 467 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 C4orf19Q8IY42 314 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 SLC7A3Q8WY07 619 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 DYDC2Q96IM9 177 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 NLRP4Q96MN2 994 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 LXNQ9BS40 222 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 LRFN3Q9BTN0 628 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 CLEC1BQ9P126 229 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
NELFE-201ENST00000375425 CD207Q9UJ71 328 aa15.94■□□□□ 0.14
NELFE-201ENST00000375425 BTBD18B2RXH4 712 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 YWHABP31946 246 aaKnown RBP15.93■□□□□ 0.14
NELFE-201ENST00000375425 PBX3P40426 434 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 PHKA2P46019 1235 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 SPIRE1Q08AE8 756 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 SMAD4Q13485 552 aaKnown RBP15.93■□□□□ 0.14
NELFE-201ENST00000375425 CTTNQ14247 550 aaKnown RBP15.93■□□□□ 0.14
NELFE-201ENST00000375425 TMEM31Q5JXX7 168 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 PDE12Q6L8Q7 609 aaKnown RBP15.93■□□□□ 0.14
NELFE-201ENST00000375425 EXOC8Q8IYI6 725 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 LRRC43Q8N309 656 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 HELQQ8TDG4 1101 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 PRPF31Q8WWY3 499 aaKnown RBP15.93■□□□□ 0.14
NELFE-201ENST00000375425 MRPS27Q92552 414 aaKnown RBP15.93■□□□□ 0.14
NELFE-201ENST00000375425 TMEM143Q96AN5 459 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 MSLNLQ96KJ4 702 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 ZNF558Q96NG5 402 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 DHX33Q9H6R0 707 aaKnown RBP15.93■□□□□ 0.14
NELFE-201ENST00000375425 ZSWIM4Q9H7M6 989 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 IFT122Q9HBG6 1241 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 PIN4Q9Y237 131 aaKnown RBP15.93■□□□□ 0.14
NELFE-201ENST00000375425 LZTS1Q9Y250 596 aa15.93■□□□□ 0.14
NELFE-201ENST00000375425 TRIOO75962 3097 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 FNDC1Q4ZHG4 1894 aaPredicted RBP15.92■□□□□ 0.14
NELFE-201ENST00000375425 FAM86C2PA6NEL3 165 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 C19orf67A6NJJ6 358 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 FSCN2O14926 492 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 ZBTB39O15060 712 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 GPR37L1O60883 481 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 SLITRK3O94933 977 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 EYA4O95677 639 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 GLP2RO95838 553 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 SRGAP2CP0DJJ0 459 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 FOSBP53539 338 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 POLGP54098 1239 aaPredicted RBP15.92■□□□□ 0.14
NELFE-201ENST00000375425 CYP4A11Q02928 519 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 KRT17Q04695 432 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 TWF2Q6IBS0 349 aaKnown RBP15.92■□□□□ 0.14
NELFE-201ENST00000375425 OTUD6AQ7L8S5 288 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 CATSPER4Q7RTX7 472 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 TPH2Q8IWU9 490 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 DIS3L2Q8IYB7 885 aaKnown RBP15.92■□□□□ 0.14
NELFE-201ENST00000375425 TRAIPQ9BWF2 469 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 C11orf16Q9NQ32 467 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 BARX2Q9UMQ3 279 aaPredicted RBP15.92■□□□□ 0.14
NELFE-201ENST00000375425 PCDHA12Q9UN75 941 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 PPME1Q9Y570 386 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 COL4A3BPQ9Y5P4 624 aa15.92■□□□□ 0.14
NELFE-201ENST00000375425 ATG2AQ2TAZ0 1938 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 KIAA1671Q9BY89 1806 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 ALADP13716 330 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 PPM1AP35813 382 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 COASYQ13057 564 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 TRIM29Q14134 588 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 CALCRLQ16602 461 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 DUSP6Q16828 381 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 LONRF3Q496Y0 759 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 XKR9Q5GH70 373 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 PLPP4Q5VZY2 271 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 TCF25Q9BQ70 676 aa15.91■□□□□ 0.14
NELFE-201ENST00000375425 BMP2KQ9NSY1 1161 aaPredicted RBP15.91■□□□□ 0.14
NELFE-201ENST00000375425 SPG21Q9NZD8 308 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms