RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 VCPP55072 806 aaKnown RBP15.54■□□□□ 0.08
CXCL12-202ENST00000374426 SMC1AQ14683 1233 aaKnown RBP15.54■□□□□ 0.08
CXCL12-202ENST00000374426 CASP10Q92851 521 aa15.54■□□□□ 0.08
CXCL12-202ENST00000374426 PRRX2Q99811 253 aa15.54■□□□□ 0.08
CXCL12-202ENST00000374426 TEKT3Q9BXF9 490 aa15.54■□□□□ 0.08
CXCL12-202ENST00000374426 NCOA5Q9HCD5 579 aaKnown RBP15.54■□□□□ 0.08
CXCL12-202ENST00000374426 DACT1Q9NYF0 836 aa15.54■□□□□ 0.08
CXCL12-202ENST00000374426 KMT2EQ8IZD2 1858 aa15.54■□□□□ 0.08
CXCL12-202ENST00000374426 VPS13AQ96RL7 3174 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 NT5C1B-RDH14C9J2C7 533 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 CLASP2O75122 1294 aaKnown RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 STBD1O95210 358 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 PDIA3P30101 505 aaKnown RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 ALDH7A1P49419 539 aaKnown RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 BCAR1P56945 870 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 EVCP57679 992 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 CCT2P78371 535 aaKnown RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 TPRNQ4KMQ1 711 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 B3GNT9Q6UX72 402 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 TMEM173Q86WV6 379 aaPredicted RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 RDM1Q8NG50 284 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 TBCKQ8TEA7 893 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 SH2D3AQ9BRG2 576 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 MRPL9Q9BYD2 267 aaKnown RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 NIFKQ9BYG3 293 aaKnown RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 ADAM7Q9H2U9 754 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 POMKQ9H5K3 350 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 SH3GLB2Q9NR46 395 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 CHST12Q9NRB3 414 aa15.53■□□□□ 0.08
CXCL12-202ENST00000374426 SEPT9Q9UHD8 586 aaPredicted RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 RIF1Q5UIP0 2472 aaKnown RBP15.53■□□□□ 0.08
CXCL12-202ENST00000374426 IGKV6-21A0A0C4DH24 114 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 TDP2O95551 362 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 PDGFBP01127 241 aaPredicted RBP15.52■□□□□ 0.08
CXCL12-202ENST00000374426 PHKA2P46019 1235 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 NLRP5P59047 1200 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 ITIH3Q06033 890 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 MTERF2Q49AM1 385 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 Q4G0T1 1027 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 XKR3Q5GH77 459 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 MIER3Q7Z3K6 550 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 ZBTB33Q86T24 672 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 TRAIPQ9BWF2 469 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 GCOM2Q9BZD3 368 aaPredicted RBP15.52■□□□□ 0.08
CXCL12-202ENST00000374426 TSHZ2Q9NRE2 1034 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 NR2E1Q9Y466 385 aa15.52■□□□□ 0.08
CXCL12-202ENST00000374426 WDR87Q6ZQQ6 2873 aa15.52■□□□□ 0.07
CXCL12-202ENST00000374426 MYO10Q9HD67 2058 aa15.52■□□□□ 0.07
CXCL12-202ENST00000374426 PTPRZ1P23471 2315 aaPredicted RBP15.51■□□□□ 0.07
CXCL12-202ENST00000374426 CYP3A7-CYP3A51PA0A087WV96 503 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 A0A087WZ62 844 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 C2CD4DB7Z1M9 353 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 ZC3H11AO75152 810 aaKnown RBP eCLIP15.51■□□□□ 0.07
CXCL12-202ENST00000374426 CXCL14O95715 111 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 CYP3A7P24462 503 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 AVPR2P30518 371 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 CDC42EP1Q00587 391 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 CES5AQ6NT32 575 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 VPS52Q8N1B4 723 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 KREMEN2Q8NCW0 462 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 ETNPPLQ8TBG4 499 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 AUTS2Q8WXX7 1259 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 LPPQ93052 612 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 TMEM169Q96HH4 297 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 NECTIN4Q96NY8 510 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 FDXACB1Q9BRP7 624 aaPredicted RBP15.51■□□□□ 0.07
CXCL12-202ENST00000374426 ZBP1Q9H171 429 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 PCDHA4Q9UN74 947 aa15.51■□□□□ 0.07
CXCL12-202ENST00000374426 SPTBN4Q9H254 2564 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-202ENST00000374426 MEIS3P2A8K0S8 358 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 M0R2N6 131 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 WEE2P0C1S8 567 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 SFPQP23246 707 aaKnown RBP eCLIP15.5■□□□□ 0.07
CXCL12-202ENST00000374426 PSMA5P28066 241 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 CA8P35219 290 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 DNM2P50570 870 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 NPY5RQ15761 445 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 LONRF3Q496Y0 759 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 TWF2Q6IBS0 349 aaKnown RBP15.5■□□□□ 0.07
CXCL12-202ENST00000374426 ZNF410Q86VK4 478 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 BCL7CQ8WUZ0 217 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-202ENST00000374426 RSPH1Q8WYR4 309 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 RIPOR3Q96MK2 946 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 MBOAT7Q96N66 472 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 C22orf23Q9BZE7 217 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 TBC1D13Q9NVG8 400 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 SUCLA2Q9P2R7 463 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-202ENST00000374426 PIN4Q9Y237 131 aaKnown RBP15.5■□□□□ 0.07
CXCL12-202ENST00000374426 IRAK3Q9Y616 596 aa15.5■□□□□ 0.07
CXCL12-202ENST00000374426 DDX11L8A8MPP1 907 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 MAFO75444 373 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-202ENST00000374426 BRD1O95696 1058 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 MTHFRP42898 656 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 MTMR3Q13615 1198 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 TOB2Q14106 344 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-202ENST00000374426 BMS1Q14692 1282 aaKnown RBP15.49■□□□□ 0.07
CXCL12-202ENST00000374426 RARS2Q5T160 578 aaKnown RBP15.49■□□□□ 0.07
CXCL12-202ENST00000374426 KANK3Q6NY19 840 aa15.49■□□□□ 0.07
CXCL12-202ENST00000374426 GLB1LQ6UWU2 654 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms