RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 DACT2Q5SW24 774 aa18.75■□□□□ 0.59
LDLRAP1-201ENST00000374338 NLGN1Q8N2Q7 840 aa18.75■□□□□ 0.59
LDLRAP1-201ENST00000374338 TSC22D3Q99576 134 aa18.75■□□□□ 0.59
LDLRAP1-201ENST00000374338 TSG101Q99816 390 aa18.75■□□□□ 0.59
LDLRAP1-201ENST00000374338 MAGEF1Q9HAY2 307 aa18.75■□□□□ 0.59
LDLRAP1-201ENST00000374338 ATF5Q9Y2D1 282 aaPredicted RBP18.75■□□□□ 0.59
LDLRAP1-201ENST00000374338 COL4A3BPQ9Y5P4 624 aa18.75■□□□□ 0.59
LDLRAP1-201ENST00000374338 PVALEFA0A1B0GWK0 134 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 COQ9O75208 318 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 NOL4O94818 638 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 DRD4P21917 467 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 ALDH1B1P30837 517 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 ZNF268Q14587 947 aaPredicted RBP18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 ZNF513Q8N8E2 541 aaPredicted RBP18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 MASTLQ96GX5 879 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 REEP2Q9BRK0 252 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 GLIS2Q9BZE0 524 aaPredicted RBP18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 FBXO28Q9NVF7 368 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 LMCD1Q9NZU5 365 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 ZNF831Q5JPB2 1677 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 MYH4Q9Y623 1939 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 GCOM1H8Y6P7 765 aaPredicted RBP18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 MYZAPP0CAP1 466 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 NR2F2P24468 414 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 SMARCA1P28370 1054 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 EPS15P42566 896 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 EHHADHQ08426 723 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 ZC2HC1CQ53FD0 456 aaPredicted RBP18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 ALS2CR12Q96Q35 445 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 KCNMB3Q9NPA1 279 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 GGT7Q9UJ14 662 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 SLC12A4Q9UP95 1085 aa18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.74■□□□□ 0.59
LDLRAP1-201ENST00000374338 PAEPP09466 180 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 FKBP3Q00688 224 aaKnown RBP18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 MKRN4PQ13434 485 aaPredicted RBP18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 FAM83BQ5T0W9 1011 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 HHIPL2Q6UWX4 724 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 TPH2Q8IWU9 490 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 PCDHB13Q9Y5F0 798 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 ALADP13716 330 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 CTCFP49711 727 aaPredicted RBP18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 FBXO11Q86XK2 927 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 RDH13Q8NBN7 331 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 ZDHHC15Q96MV8 337 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 EPAS1Q99814 870 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 RUSC1Q9BVN2 902 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 PALMO75781 387 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 GSTA1P08263 222 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 B4GALNT2Q8NHY0 566 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 NEUROG2Q9H2A3 272 aa18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 NOVA2Q9UNW9 492 aaKnown RBP18.73■□□□□ 0.59
LDLRAP1-201ENST00000374338 SCN9AQ15858 1988 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 CENPFP49454 3210 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 HSD17B3P37058 310 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 PPP2R2AP63151 447 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 COG2Q14746 738 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 UAP1Q16222 522 aaPredicted RBP18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 CFAP221Q4G0U5 840 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 WHAMMQ8TF30 809 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 PLCB1Q9NQ66 1216 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 YDJCA8MPS7 323 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 MSH4O15457 936 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 SMIM24O75264 130 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 SPATA31C1P0DKV0 1188 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 MYBL1P10243 752 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 HSPA9P38646 679 aaKnown RBP18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 OSBPL1AQ9BXW6 950 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 TSGA10Q9BZW7 698 aa18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 DHX36Q9H2U1 1008 aaKnown RBP18.72■□□□□ 0.59
LDLRAP1-201ENST00000374338 A0A087X0T9 212 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 FAM228BP0C875 321 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 NMT1P30419 496 aaKnown RBP18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 HOXD13P35453 343 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 HGSNATQ68CP4 663 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 CCDC65Q8IXS2 484 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 CCDC197Q8NCU1 140 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 AMNQ9BXJ7 453 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 AP1M1Q9BXS5 423 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 PCDHA2Q9Y5H9 948 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 PLIN4Q96Q06 1357 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 DPPA5A6NC42 116 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 CFAP73A6NFT4 308 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 H0YGN5 161 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 GCNT3O95395 438 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 SLC12A3P55017 1021 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 KCNH2Q12809 1159 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 ZCWPW2Q504Y3 356 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 PDXDC1Q6P996 788 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 LRIG3Q6UXM1 1119 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 UBLCP1Q8WVY7 318 aaPredicted RBP18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 AJAP1Q9UKB5 411 aaPredicted RBP18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 ZBTB21Q9ULJ3 1066 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 NFS1Q9Y697 457 aa18.71■□□□□ 0.59
LDLRAP1-201ENST00000374338 H0YIN7 160 aa18.7■□□□□ 0.58
LDLRAP1-201ENST00000374338 CTNNA1P35221 906 aaKnown RBP18.7■□□□□ 0.58
LDLRAP1-201ENST00000374338 LRRC63Q05C16 580 aa18.7■□□□□ 0.58
LDLRAP1-201ENST00000374338 SYDE2Q5VT97 1194 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms