RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 IRF2BP1Q8IU81 584 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 MMTAG2Q9BU76 263 aaKnown RBP9.12□□□□□ -0.95
PTPRK-206ENST00000368215 KCNH7Q9NS40 1196 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 C5P01031 1676 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 PPFIA4O75335 1185 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 CYP2C19P33261 490 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 SREBF1P36956 1147 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 KRT76Q01546 638 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 GPATCH11Q8N954 259 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 MAIP1Q8WWC4 291 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 RFFLQ8WZ73 363 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 HAS1Q92839 578 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 MSTO1Q9BUK6 570 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 KIFC3Q9BVG8 833 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 UNC45AQ9H3U1 944 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 KCND1Q9NSA2 647 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-206ENST00000368215 PNMA2Q9UL42 364 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 HPCAL4Q9UM19 191 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 PARP4Q9UKK3 1724 aaKnown RBP9.12□□□□□ -0.95
PTPRK-206ENST00000368215 SCN11AQ9UI33 1791 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 LRRIQ3A6PVS8 624 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-206ENST00000368215 H3BQF6 201 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
PTPRK-206ENST00000368215 ECEL1O95672 775 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 ATP5DP30049 168 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 BPIFB4P59827 614 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 BFSP1Q12934 665 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 PPP2R5AQ15172 486 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 NAB2Q15742 525 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 SCYL2Q6P3W7 929 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 CACNA2D3Q8IZS8 1091 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 CCDC63Q8NA47 563 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 SLC17A8Q8NDX2 589 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 SLC35G2Q8TBE7 412 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 SHISA4Q96DD7 197 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 MTMR8Q96EF0 704 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 CDHR1Q96JP9 859 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 HSPBP1Q9NZL4 362 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 L1RE1Q9UN81 338 aa9.12□□□□□ -0.95
PTPRK-206ENST00000368215 TNNC2P02585 160 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 PON1P27169 355 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 GTF2A1P52655 376 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 PNMA8AQ86V59 439 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 THNSL1Q8IYQ7 743 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 CCDC89Q8N998 374 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 SLC30A5Q8TAD4 765 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 NSUN6Q8TEA1 469 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 GPRC5CQ9NQ84 441 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 APEX2Q9UBZ4 518 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 TBK1Q9UHD2 729 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 RCCD1A6NED2 376 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 RGL2O15211 777 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 ACSL3O95573 720 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 KRT14P02533 472 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 DPEP1P16444 411 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 COPB2P35606 906 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 DYNLT1P63172 113 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 CUL1Q13616 776 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 COG2Q14746 738 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 FIGNQ5HY92 759 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 WDR59Q6PJI9 974 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 SAMD7Q7Z3H4 446 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 NEK9Q8TD19 979 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 DCPSQ96C86 337 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 NLRP4Q96MN2 994 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 MXRA8Q9BRK3 442 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 C11orf70Q9BRQ4 267 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 NUP85Q9BW27 656 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 EHD4Q9H223 541 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 SLC16A3O15427 465 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 RAD51CO43502 376 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 EZRP15311 586 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 HDLBPQ00341 1268 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 TMEM119Q4V9L6 283 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 FAM160B1Q5W0V3 765 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 PAPD7Q5XG87 772 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 STYK1Q6J9G0 422 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 TMEM270Q6UE05 265 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 ZNF564Q8TBZ8 553 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 VTI1AQ96AJ9 217 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 HAUS1Q96CS2 278 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 TAAR1Q96RJ0 339 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 AGPAT1Q99943 283 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 STK33Q9BYT3 514 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 TAF1DQ9H5J8 278 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 EML1O00423 815 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 TTI1O43156 1089 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 CTNND1O60716 968 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 ATP2A2P16615 1042 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 STX2P32856 288 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 RWDD2BP57060 319 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 KCNA1Q09470 495 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 KRT39Q6A163 491 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 PPP1R21Q6ZMI0 780 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 TRIM59Q8IWR1 403 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 RNPC3Q96LT9 517 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms