RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 PTGS2P35354 604 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 MYBPC3Q14896 1274 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 SLFN12LQ6IEE8 588 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 DPY19L2P1Q6NXN4 242 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 ZNF662Q6ZS27 426 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 LRP10Q7Z4F1 713 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 VRK3Q8IV63 474 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 GSPT2Q8IYD1 628 aaKnown RBP3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 MB21D1Q8N884 522 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 MDGA1Q8NFP4 955 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 SLC25A43Q8WUT9 341 aaPredicted RBP3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 E2F7Q96AV8 911 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 DYDC2Q96IM9 177 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 C16orf92Q96LL3 132 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 ZNF512Q96ME7 567 aaPredicted RBP3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 DNAJC7Q99615 494 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 TANGO6Q9C0B7 1094 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 NCOA5Q9HCD5 579 aaKnown RBP3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 POLR3BQ9NW08 1133 aaPredicted RBP3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 KCMF1Q9P0J7 381 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 DNAI1Q9UI46 699 aa3.18□□□□□ -1.9
RNU4-90P-201ENST00000362773 GRID2IPA4D2P6 1211 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 GCP02774 474 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 HNRNPLP14866 589 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 PTX3P26022 381 aaPredicted RBP3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 PTTG1IPP53801 180 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 SMAD3P84022 425 aaKnown RBP3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 ARHGAP44Q17R89 818 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 TTC38Q5R3I4 469 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 NAIF1Q69YI7 327 aaPredicted RBP3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 ZCCHC8Q6NZY4 707 aaKnown RBP3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 BMP8AQ7Z5Y6 402 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 CXorf67Q86X51 503 aaPredicted RBP3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 ZNF276Q8N554 614 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 CHST14Q8NCH0 376 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 ZSWIM2Q8NEG5 633 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 ATXN2LQ8WWM7 1075 aaKnown RBP3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 WDR92Q96MX6 357 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 HS3ST4Q9Y661 456 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 PTCH2Q9Y6C5 1203 aa3.17□□□□□ -1.9
RNU4-90P-201ENST00000362773 A0A0A6YYK5 440 aaPredicted RBP3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 CCDC163A0A0D9SF12 145 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 GOLGA8BA8MQT2 603 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 GOLGA6L6A8MZA4 724 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 CFBP00751 764 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 LMNAP02545 664 aaKnown RBP3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 JUNP05412 331 aaKnown RBP3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 ATP2B1P20020 1258 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 IL12RB1P42701 662 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 KIR2DL3P43628 341 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 RBL2Q08999 1139 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 SPIDRQ14159 915 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 PRAMEF9Q5VWM5 478 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 CREB3L3Q68CJ9 461 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 MFSD5Q6N075 450 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 ESRP1Q6NXG1 681 aaKnown RBP3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 LRRC55Q6ZSA7 311 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 KANSL1Q7Z3B3 1105 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 CMTM4Q8IZR5 234 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 KIAA1958Q8N8K9 716 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 NTN5Q8WTR8 489 aaPredicted RBP3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 THAP3Q8WTV1 239 aaPredicted RBP3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 CLUHP3Q96NS8 147 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 SOX7Q9BT81 388 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 PITHD1Q9GZP4 211 aaPredicted RBP3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 ENKD1Q9H0I2 346 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 ACSS2Q9NR19 701 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 RCAN3Q9UKA8 241 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 FZD1Q9UP38 647 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 COL4A3Q01955 1670 aa3.16□□□□□ -1.9
RNU4-90P-201ENST00000362773 A0A0A6YYJ9 748 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 PTPDC1A2A3K4 754 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 PLD2O14939 933 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 MTSS1O43312 755 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 MFAP3LO75121 409 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 DNAJC8O75937 253 aaPredicted RBP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 IPO13O94829 963 aaKnown RBP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 APPP05067 770 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 ITGB1P05556 798 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 GTF2F1P35269 517 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 RBM25P49756 843 aaKnown RBP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 ZNF460Q14592 562 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 EPHA7Q15375 998 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 FAM214AQ32MH5 1076 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 C2orf27AQ580R0 203 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 DCAF17Q5H9S7 520 aaPredicted RBP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 KRT40Q6A162 431 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 UNQ6494/PRO21346Q6UXR6 183 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 PRIMA1Q86XR5 153 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 LILRB2Q8N423 598 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 PROKR1Q8TCW9 393 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 ST8SIA2Q92186 375 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 TUBGCP5Q96RT8 1024 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 HIRIP3Q9BW71 556 aaPredicted RBP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 ZNF768Q9H5H4 540 aaKnown RBP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 C14orf93Q9H972 538 aaKnown RBP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 SAMD15Q9P1V8 674 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 NCDNQ9UBB6 729 aa3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 PPP1R1BQ9UD71 204 aaPredicted RBP3.15□□□□□ -1.91
RNU4-90P-201ENST00000362773 PACSIN3Q9UKS6 424 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms