RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 MAP2K1Q02750 393 aaPredicted RBP16.17■□□□□ 0.18
CXCL12-201ENST00000343575 KNOP1Q1ED39 458 aaKnown RBP16.17■□□□□ 0.18
CXCL12-201ENST00000343575 FOXR2Q6PJQ5 311 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 LRRC55Q6ZSA7 311 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 DNAJC5GQ8N7S2 189 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 ASAP3Q8TDY4 903 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 KIFC3Q9BVG8 833 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 SRRTQ9BXP5 876 aaKnown RBP16.17■□□□□ 0.18
CXCL12-201ENST00000343575 POLR3FQ9H1D9 316 aaPredicted RBP16.17■□□□□ 0.18
CXCL12-201ENST00000343575 ST6GALNAC4Q9H4F1 302 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 WBP1LQ9NX94 342 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
CXCL12-201ENST00000343575 BICDL2A1A5D9 508 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 SLC16A4O15374 487 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 F2P00734 622 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 TPD52L1Q16890 204 aaPredicted RBP16.16■□□□□ 0.18
CXCL12-201ENST00000343575 TMEM161BQ8NDZ6 487 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 ZNF397Q8NF99 534 aaPredicted RBP16.16■□□□□ 0.18
CXCL12-201ENST00000343575 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 SLC7A3Q8WY07 619 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 PPME1Q9Y570 386 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 C22orf31O95567 290 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 HMGCRP04035 888 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 GLRA2P23416 452 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 GJA9P57773 515 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 NKX3-2P78367 333 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 GTF2BQ00403 316 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 FANCCQ00597 558 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 LRRC63Q05C16 580 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 TBC1D8BQ0IIM8 1120 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 CEP135Q66GS9 1140 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 HAUS6Q7Z4H7 955 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 CSGALNACT2Q8N6G5 542 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 SPIRE2Q8WWL2 714 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 UPF3AQ9H1J1 476 aaKnown RBP16.16■□□□□ 0.18
CXCL12-201ENST00000343575 C17orf75Q9HAS0 396 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 INTS13Q9NVM9 706 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 TRAF3IP3Q9Y228 551 aa16.16■□□□□ 0.18
CXCL12-201ENST00000343575 CCDC66A2RUB6 948 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 LRRC10BA6NIK2 292 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 K7ENM7 598 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 HAS3O00219 553 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 PGK1P00558 417 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 CNGA1P29973 690 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 FSCN1Q16658 493 aaKnown RBP16.15■□□□□ 0.18
CXCL12-201ENST00000343575 ZNF771Q7L3S4 317 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-201ENST00000343575 ZC3H3Q8IXZ2 948 aaKnown RBP16.15■□□□□ 0.18
CXCL12-201ENST00000343575 KRT222Q8N1A0 295 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 LRRC71Q8N4P6 559 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 LINC01465Q8N7H1 131 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 RAET1EQ8TD07 263 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 PPP1R13LQ8WUF5 828 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 C16orf45Q96MC5 204 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-201ENST00000343575 EVPLQ92817 2033 aa16.15■□□□□ 0.18
CXCL12-201ENST00000343575 PDXKO00764 312 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 ADAMTS4O75173 837 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 CPT1AP50416 773 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 PURAQ00577 322 aaKnown RBP16.14■□□□□ 0.17
CXCL12-201ENST00000343575 DMP1Q13316 513 aaPredicted RBP16.14■□□□□ 0.17
CXCL12-201ENST00000343575 HIC1Q14526 733 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 ZNF484Q5JVG2 852 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 TAS1R3Q7RTX0 852 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 XPO4Q9C0E2 1151 aaKnown RBP16.14■□□□□ 0.17
CXCL12-201ENST00000343575 AP5M1Q9H0R1 490 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 THAP9Q9H5L6 903 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 IFNKQ9P0W0 207 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 ARHGAP28Q9P2N2 729 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 ZNF215Q9UL58 517 aaPredicted RBP16.14■□□□□ 0.17
CXCL12-201ENST00000343575 CCDC169A6NNP5 214 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 TPM4P67936 248 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 IGBP1P78318 339 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 KIF18AQ8NI77 898 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 PRPF31Q8WWY3 499 aaKnown RBP16.14■□□□□ 0.17
CXCL12-201ENST00000343575 SUGCTQ9HAC7 445 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 PTCH2Q9Y6C5 1203 aa16.14■□□□□ 0.17
CXCL12-201ENST00000343575 TISP43B9A030 160 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 GJB1P08034 283 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 C6orf222P0C671 652 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-201ENST00000343575 KLRC1P26715 233 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 CAPSQ13938 189 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 KIAA0753Q2KHM9 967 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 EDRF1Q3B7T1 1238 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 KCNN1Q92952 543 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 KMT5AQ9NQR1 393 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 TYW1Q9NV66 732 aaKnown RBP16.13■□□□□ 0.17
CXCL12-201ENST00000343575 UBE4BO95155 1302 aa16.13■□□□□ 0.17
CXCL12-201ENST00000343575 COL1A2P08123 1366 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 KCNJ18B7U540 433 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 MYL3P08590 195 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 CLCN3P51790 818 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 GSDMDP57764 484 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 FKBP3Q00688 224 aaKnown RBP16.12■□□□□ 0.17
CXCL12-201ENST00000343575 KCNJ12Q14500 433 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 KRT31Q15323 416 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 IER5Q5VY09 327 aa16.12■□□□□ 0.17
CXCL12-201ENST00000343575 CCSAPQ6IQ19 270 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-201ENST00000343575 EFCAB12Q6NXP0 572 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms