RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 CCL14Q16627 93 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 ZC2HC1CQ53FD0 456 aaPredicted RBP11.77□□□□□ -0.52
CASP3-201ENST00000308394 TCP11X2Q5H9J9 407 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 TRIM50Q86XT4 487 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 CTAGE1Q96RT6 745 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 TIPINQ9BVW5 301 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 THAP9Q9H5L6 903 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 FLRT1Q9NZU1 646 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 SUN2Q9UH99 717 aa11.77□□□□□ -0.52
CASP3-201ENST00000308394 RBM47A0AV96 593 aaKnown RBP11.77□□□□□ -0.53
CASP3-201ENST00000308394 DGAT1O75907 488 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 CTGFP29279 349 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 CDC25BP30305 580 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 CYP2C19P33261 490 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 TNNT3P45378 269 aaPredicted RBP11.77□□□□□ -0.53
CASP3-201ENST00000308394 POLGP54098 1239 aaPredicted RBP11.77□□□□□ -0.53
CASP3-201ENST00000308394 SOX10P56693 466 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 SPAG1Q07617 926 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 ARHGAP1Q07960 439 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 PTPN21Q16825 1174 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 FILIP1LQ4L180 1135 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 CCDC70Q6NSX1 233 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 ZNF720Q7Z2F6 126 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 FILIP1Q7Z7B0 1213 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 AFAP1L1Q8TED9 768 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 NOC3LQ8WTT2 800 aaKnown RBP11.77□□□□□ -0.53
CASP3-201ENST00000308394 ARHGAP39Q9C0H5 1083 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 GJD2Q9UKL4 321 aa11.77□□□□□ -0.53
CASP3-201ENST00000308394 PCNTO95613 3336 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 K7ENM7 598 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 HOXC6P09630 235 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 PLS3P13797 630 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 CASQ1P31415 396 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 FCGRTP55899 365 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 PEX3P56589 373 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 KRT31Q15323 416 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 KNOP1Q1ED39 458 aaKnown RBP11.76□□□□□ -0.53
CASP3-201ENST00000308394 STXBP4Q6ZWJ1 553 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 EPM2AIP1Q7L775 607 aaPredicted RBP11.76□□□□□ -0.53
CASP3-201ENST00000308394 KSR1Q8IVT5 923 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 VPS16Q9H269 839 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 ATP6V0A4Q9HBG4 840 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 FAN1Q9Y2M0 1017 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 CAND2O75155 1236 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 FGFR1OPO95684 399 aaKnown RBP11.76□□□□□ -0.53
CASP3-201ENST00000308394 FAM163BP0C2L3 166 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 SMPD1P17405 629 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 IQSEC1Q6DN90 963 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 TMC6Q7Z403 805 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 IRF2BP1Q8IU81 584 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 FAM114A1Q8IWE2 563 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
CASP3-201ENST00000308394 ZNF507Q8TCN5 953 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 AFG1LQ8WV93 481 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 SREK1Q8WXA9 508 aaKnown RBP11.76□□□□□ -0.53
CASP3-201ENST00000308394 USP6NLQ92738 828 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 FIZ1Q96SL8 496 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 APBA2Q99767 749 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 KCTD10Q9H3F6 313 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 SMARCAD1Q9H4L7 1026 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 TAB2Q9NYJ8 693 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 PCDHB13Q9Y5F0 798 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 LOXHD1Q8IVV2 1947 aa11.76□□□□□ -0.53
CASP3-201ENST00000308394 CCDC169A6NNP5 214 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 N4BP3O15049 544 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 TRPA1O75762 1119 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 HTRA3P83110 453 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 LACTBP83111 547 aaPredicted RBP11.75□□□□□ -0.53
CASP3-201ENST00000308394 FKBP3Q00688 224 aaKnown RBP11.75□□□□□ -0.53
CASP3-201ENST00000308394 TNFAIP2Q03169 654 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 DUSP28Q4G0W2 176 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 PLPPR4Q7Z2D5 763 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 CCDC186Q7Z3E2 898 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 MCPH1Q8NEM0 835 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 SLC7A3Q8WY07 619 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 CNOT6LQ96LI5 555 aaKnown RBP11.75□□□□□ -0.53
CASP3-201ENST00000308394 NIFKQ9BYG3 293 aaKnown RBP11.75□□□□□ -0.53
CASP3-201ENST00000308394 SUFUQ9UMX1 484 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 EIF3DO15371 548 aaKnown RBP eCLIP11.75□□□□□ -0.53
CASP3-201ENST00000308394 LGR5O75473 907 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 EEF1GP26641 437 aaKnown RBP11.75□□□□□ -0.53
CASP3-201ENST00000308394 HOXD13P35453 343 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 DMP1Q13316 513 aaPredicted RBP11.75□□□□□ -0.53
CASP3-201ENST00000308394 KLHL23Q8NBE8 558 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 PHC3Q8NDX5 983 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 OR6J1Q8NGC5 347 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 PPTC7Q8NI37 304 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 KIFAP3Q92845 792 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 FAM167AQ96KS9 214 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 LIMA1Q9UHB6 759 aaKnown RBP11.75□□□□□ -0.53
CASP3-201ENST00000308394 TRPC6Q9Y210 931 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 DOCK3Q8IZD9 2030 aa11.75□□□□□ -0.53
CASP3-201ENST00000308394 A0A1B0GTH6 734 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 SLC16A4O15374 487 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 CALUO43852 315 aaPredicted RBP11.74□□□□□ -0.53
CASP3-201ENST00000308394 MTIF2P46199 727 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms