RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TARBP2Q15633 366 aaKnown RBP19.89■□□□□ 0.77
VIM-201ENST00000224237 E4F1Q66K89 784 aaPredicted RBP19.89■□□□□ 0.77
VIM-201ENST00000224237 C12orf56Q8IXR9 622 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 CCAR2Q8N163 923 aaKnown RBP19.89■□□□□ 0.77
VIM-201ENST00000224237 BSNDQ8WZ55 320 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 CEP89Q96ST8 783 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 TINF2Q9BSI4 451 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 IKZF4Q9H2S9 585 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 FRMD4BQ9Y2L6 1034 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 SNAI1O95863 264 aaPredicted RBP19.88■□□□□ 0.77
VIM-201ENST00000224237 GH1P01241 217 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 KLK7P49862 253 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 TERF1P54274 439 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 MAP4K3Q8IVH8 894 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 FAM186BQ8IYM0 893 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 HHIPL1Q96JK4 782 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 ZFYVE28Q9HCC9 887 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 TBX20Q9UMR3 447 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 DENND3A2RUS2 1198 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 RNF225M0QZC1 329 aaPredicted RBP19.88■□□□□ 0.77
VIM-201ENST00000224237 CCP110O43303 1012 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 SCP2P22307 547 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 ARHGAP1Q07960 439 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 KCNH2Q12809 1159 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 MORN1Q5T089 497 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 TRIM50Q86XT4 487 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 OR8K1Q8NGG5 319 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 ATP8B4Q8TF62 1192 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 EMID1Q96A84 441 aaPredicted RBP19.88■□□□□ 0.77
VIM-201ENST00000224237 ABHD16BQ9H3Z7 469 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 SMARCAD1Q9H4L7 1026 aa19.88■□□□□ 0.77
VIM-201ENST00000224237 RASSF10A6NK89 507 aa19.87■□□□□ 0.77
VIM-201ENST00000224237 CYP2J2P51589 502 aa19.87■□□□□ 0.77
VIM-201ENST00000224237 TSR1Q2NL82 804 aaKnown RBP19.87■□□□□ 0.77
VIM-201ENST00000224237 EXOC8Q8IYI6 725 aa19.87■□□□□ 0.77
VIM-201ENST00000224237 ZNF397Q8NF99 534 aaPredicted RBP19.87■□□□□ 0.77
VIM-201ENST00000224237 BORCS6Q96GS4 357 aa19.87■□□□□ 0.77
VIM-201ENST00000224237 DNAJC7Q99615 494 aa19.87■□□□□ 0.77
VIM-201ENST00000224237 KIFC3Q9BVG8 833 aa19.87■□□□□ 0.77
VIM-201ENST00000224237 MAFO75444 373 aaPredicted RBP19.86■□□□□ 0.77
VIM-201ENST00000224237 AFPP02771 609 aaKnown RBP19.86■□□□□ 0.77
VIM-201ENST00000224237 MARK3P27448 753 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 ADCYAP1R1P41586 468 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 ZBED6P86452 979 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 MAP2K5Q13163 448 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 PPP2R5AQ15172 486 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 DCAF17Q5H9S7 520 aaPredicted RBP19.86■□□□□ 0.77
VIM-201ENST00000224237 DNTTIP2Q5QJE6 756 aaKnown RBP19.86■□□□□ 0.77
VIM-201ENST00000224237 TMTC1Q8IUR5 882 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 KCNN1Q92952 543 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 MMRN2Q9H8L6 949 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 ARHGAP28Q9P2N2 729 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.86■□□□□ 0.77
VIM-201ENST00000224237 USP27XA6NNY8 438 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 GAS2O43903 313 aaKnown RBP19.86■□□□□ 0.77
VIM-201ENST00000224237 EXOC3O60645 756 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 ARL2P36404 184 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 TM4SF4P48230 202 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 TCERG1LQ5VWI1 586 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 CYP26C1Q6V0L0 522 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 NEK11Q8NG66 645 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 PPTC7Q8NI37 304 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 TMEM143Q96AN5 459 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 FAM207AQ9NSI2 230 aaPredicted RBP19.86■□□□□ 0.77
VIM-201ENST00000224237 AGPAT5Q9NUQ2 364 aa19.86■□□□□ 0.77
VIM-201ENST00000224237 ADGRA3Q8IWK6 1321 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 AOC2O75106 756 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 HOXC6P09630 235 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 NAMPTP43490 491 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 KCNMA1Q12791 1236 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 IRF5Q13568 498 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 ACVR2BQ13705 512 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 PLCB4Q15147 1175 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 CCDC155Q8N6L0 562 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 SLC35C1Q96A29 364 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 TRMT1Q9NXH9 659 aaKnown RBP19.85■□□□□ 0.77
VIM-201ENST00000224237 ERAP1Q9NZ08 941 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 FLRT1Q9NZU1 646 aa19.85■□□□□ 0.77
VIM-201ENST00000224237 SOWAHDA6NJG2 315 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 CTGFP29279 349 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 EDEM3Q9BZQ6 932 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 PCNTO95613 3336 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 ZSWIM8A7E2V4 1837 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 ZSCAN12O43309 604 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 HBP1O60381 514 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 GLRA2P23416 452 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 DUSP28Q4G0W2 176 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 IQSEC1Q6DN90 963 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 XXYLT1Q8NBI6 393 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 PPP1R13BQ96KQ4 1090 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 JPH2Q9BR39 696 aaPredicted RBP19.84■□□□□ 0.77
VIM-201ENST00000224237 CBWD1Q9BRT8 395 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 HSPBP1Q9NZL4 362 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 ZHX1Q9UKY1 873 aaPredicted RBP19.84■□□□□ 0.77
VIM-201ENST00000224237 TRPC6Q9Y210 931 aa19.84■□□□□ 0.77
VIM-201ENST00000224237 MAPK13O15264 365 aa19.83■□□□□ 0.76
VIM-201ENST00000224237 CNGA1P29973 690 aa19.83■□□□□ 0.76
VIM-201ENST00000224237 CCL14Q16627 93 aa19.83■□□□□ 0.76
VIM-201ENST00000224237 BRDTQ58F21 947 aaPredicted RBP19.83■□□□□ 0.76
VIM-201ENST00000224237 ASAP3Q8TDY4 903 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms