RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 NynrinQ5DTZ0 1840 aa6.77□□□□□ -1.33
Lig4-202ENSMUST00000170033 Odf2A3KGV1 830 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gm44G3UW88 330 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Usp4P35123 962 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rnf19aP50636 840 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Atp8a1P70704 1164 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Meis2P97367 477 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cdca2Q14B71 982 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Nlrx1Q3TL44 975 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rasip1Q3U0S6 961 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Qrich1Q3UA37 777 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ccdc148Q6P5U8 527 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Fbxo11Q7TPD1 930 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Fnip2Q80TD3 1108 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc51bQ80WK2 128 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ddx42Q810A7 929 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rufy1Q8BIJ7 712 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc9a9Q8BZ00 644 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Prr33Q8C494 260 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Atp1a1Q8VDN2 1023 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Aipl1Q924K1 328 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Thumpd2Q9CZB3 528 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Q9DAQ4 598 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Drg2Q9QXB9 364 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Myh14Q6URW6 2000 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gm14525B1AZA0 212 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gm2012B1B0R1 212 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Kcnh2O35219 1162 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Exoc4O35382 975 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Timm44O35857 452 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Lire1P11260 357 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc1a1P51906 523 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Dnaja1P63037 397 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cct6aP80317 531 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Vars2Q3U2A8 1060 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Klrg2Q3UM83 387 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sco1Q5SUC9 284 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Satb1Q60611 764 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Zp3rQ60736 579 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Arhgef2Q60875 985 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mapk6Q61532 720 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ptger2Q62053 362 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gm14819Q62478 212 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Tpp2Q64514 1262 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ncapg2Q6DFV1 1138 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ddx31Q6NZQ2 687 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Herc4Q6PAV2 1057 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 PigsQ6PD26 555 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Nyap1Q6PFX7 833 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 PolnQ7TQ07 864 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Znf18Q810A1 556 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sap130Q8BIH0 1057 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Armc6Q8BNU0 468 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Usp38Q8BW70 1042 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ddx19bQ8BZY3 494 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Iws1Q8C1D8 766 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ccdc113Q8C5T8 377 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Lrrc42Q8R2U7 421 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Dnajc28Q8VCE1 385 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Slc44a4Q91VA1 707 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mapk8Q91Y86 384 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Grin3bQ91ZU9 1003 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Q922C1 641 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 PdhbQ9D051 359 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 PpihQ9D868 188 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rilpl1Q9JJC6 406 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sertad1Q9JL10 236 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Usp14Q9JMA1 493 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Adgrf5G5E8Q8 1348 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Btbd18A0A0A6YY25 723 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Il27raO70394 623 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Myl1P05977 188 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 ClgnP52194 611 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Psmc1P62192 440 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rit2P70425 217 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cyp2e1Q05421 493 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Xxylt1Q3U4G3 392 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Epha7Q61772 998 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 CrkQ64010 304 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Raver2Q7TPD6 673 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Olfr832Q7TRG9 312 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pank4Q80YV4 820 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 DcakdQ8BHC4 231 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Tmem62Q8BXJ9 643 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Q8CD60 292 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Tma7Q8K003 64 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Il17cQ8K4C5 194 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 CrygnQ8VHL5 183 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Yipf1Q91VU1 306 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ttc5Q99LG4 440 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pabpc6Q9D4E6 643 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gtf2iQ9ESZ8 998 aaKnown RBP6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Azi2Q9QYP6 405 aa6.76□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gm10110D3Z5M2 615 aa6.75□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gm6121L7MUF1 212 aa6.75□□□□□ -1.33
Lig4-202ENSMUST00000170033 Nrg3O35181 713 aa6.75□□□□□ -1.33
Lig4-202ENSMUST00000170033 Xbp1O35426 267 aa6.75□□□□□ -1.33
Lig4-202ENSMUST00000170033 ClppO88696 272 aa6.75□□□□□ -1.33
Lig4-202ENSMUST00000170033 CatspereP0DP43 985 aa6.75□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rps6ka1P18653 724 aa6.75□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms