RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A AOS1Q06624 347 aa20.05■□□□□ 0.8
TRN1tP(UGG)A NTH2P35172 780 aa20.04■□□□□ 0.8
TRN1tP(UGG)A OSM1P21375 501 aaKnown RBP20.02■□□□□ 0.8
TRN1tP(UGG)A NPR2P39923 615 aa20■□□□□ 0.79
TRN1tP(UGG)A THI22Q06490 572 aa20■□□□□ 0.79
TRN1tP(UGG)A RPP0P05317 312 aaKnown RBP19.95■□□□□ 0.78
TRN1tP(UGG)A PRI1P10363 409 aa19.95■□□□□ 0.78
TRN1tP(UGG)A YNL050CP53952 270 aa19.95■□□□□ 0.78
TRN1tP(UGG)A KCC4P25389 1037 aa19.94■□□□□ 0.78
TRN1tP(UGG)A YBP2P53169 641 aa19.93■□□□□ 0.78
TRN1tP(UGG)A NSR1P27476 414 aaKnown RBP RIP-Chip data19.92■□□□□ 0.78not detected
TRN1tP(UGG)A RTT109Q07794 436 aa19.91■□□□□ 0.78
TRN1tP(UGG)A TPD3P31383 635 aa19.9■□□□□ 0.78
TRN1tP(UGG)A VPS27P40343 622 aaKnown RBP19.9■□□□□ 0.78
TRN1tP(UGG)A SAP155P43612 1002 aa19.9■□□□□ 0.78
TRN1tP(UGG)A LYS4P49367 693 aaPredicted RBP19.88■□□□□ 0.77
TRN1tP(UGG)A HEF3P53978 1044 aaKnown RBP19.87■□□□□ 0.77
TRN1tP(UGG)A SUI2P20459 304 aaKnown RBP19.86■□□□□ 0.77
TRN1tP(UGG)A ZDS1P50111 915 aaKnown RBP19.86■□□□□ 0.77
TRN1tP(UGG)A ALE1Q08548 619 aa19.86■□□□□ 0.77
TRN1tP(UGG)A GRX1P25373 110 aaKnown RBP19.85■□□□□ 0.77
TRN1tP(UGG)A UGA3P26370 528 aa19.85■□□□□ 0.77
TRN1tP(UGG)A CDC45Q08032 650 aa19.85■□□□□ 0.77
TRN1tP(UGG)A PRS1P32895 427 aaKnown RBP19.84■□□□□ 0.77
TRN1tP(UGG)A NSE3Q05541 303 aa19.83■□□□□ 0.77
TRN1tP(UGG)A MAM1P40065 302 aa19.82■□□□□ 0.76
TRN1tP(UGG)A RMT2Q03305 412 aa19.82■□□□□ 0.76
TRN1tP(UGG)A MSB4Q12317 492 aa19.82■□□□□ 0.76
TRN1tP(UGG)A RRT14P40470 206 aa19.81■□□□□ 0.76
TRN1tP(UGG)A YBR287WP38355 427 aa19.79■□□□□ 0.76
TRN1tP(UGG)A TUM1Q08686 304 aaKnown RBP19.79■□□□□ 0.76
TRN1tP(UGG)A YBL086CP38177 466 aa19.78■□□□□ 0.76
TRN1tP(UGG)A GYP7P48365 746 aa19.78■□□□□ 0.76
TRN1tP(UGG)A BMS1Q08965 1183 aaKnown RBP19.77■□□□□ 0.76
TRN1tP(UGG)A LYS2P07702 1392 aa19.77■□□□□ 0.76
TRN1tP(UGG)A RVB2Q12464 471 aaKnown RBP19.76■□□□□ 0.75
TRN1tP(UGG)A COQ4O13525 335 aa19.75■□□□□ 0.75
TRN1tP(UGG)A RAD4P14736 754 aa19.74■□□□□ 0.75
TRN1tP(UGG)A CTH1P47976 325 aa19.74■□□□□ 0.75
TRN1tP(UGG)A ALD2P47771 506 aa19.73■□□□□ 0.75
TRN1tP(UGG)A GRE2Q12068 342 aaKnown RBP19.73■□□□□ 0.75
TRN1tP(UGG)A NOP53Q12080 455 aaKnown RBP19.73■□□□□ 0.75
TRN1tP(UGG)A UTP10P42945 1769 aaKnown RBP19.72■□□□□ 0.75
TRN1tP(UGG)A SSA2P10592 639 aaKnown RBP19.69■□□□□ 0.74
TRN1tP(UGG)A GTT3P39996 337 aa19.69■□□□□ 0.74
TRN1tP(UGG)A BDF1P35817 686 aa19.68■□□□□ 0.74
TRN1tP(UGG)A BUG1Q12191 341 aa19.68■□□□□ 0.74
TRN1tP(UGG)A UGA2P38067 497 aa19.67■□□□□ 0.74
TRN1tP(UGG)A SRT1Q03175 343 aa19.66■□□□□ 0.74
TRN1tP(UGG)A MDG1P53885 366 aa19.64■□□□□ 0.73
TRN1tP(UGG)A BUD27P43573 796 aaKnown RBP RIP-Chip data19.63■□□□□ 0.73not detected
TRN1tP(UGG)A TEA1P47988 759 aa19.63■□□□□ 0.73
TRN1tP(UGG)A YRB30P53107 440 aaPredicted RBP19.63■□□□□ 0.73
TRN1tP(UGG)A SSP2Q08646 371 aa19.63■□□□□ 0.73
TRN1tP(UGG)A RPG1P38249 964 aaKnown RBP19.62■□□□□ 0.73
TRN1tP(UGG)A ZDS2P54786 942 aa19.62■□□□□ 0.73
TRN1tP(UGG)A YOL057WQ08225 711 aa19.61■□□□□ 0.73
TRN1tP(UGG)A PHM7Q12252 991 aa19.6■□□□□ 0.73
TRN1tP(UGG)A ALD3P54114 506 aa19.58■□□□□ 0.72
TRN1tP(UGG)A NAB6Q03735 1134 aaKnown RBP RIP-Chip data19.58■□□□□ 0.72not detected
TRN1tP(UGG)A MAK21Q12176 1025 aaKnown RBP19.58■□□□□ 0.72
TRN1tP(UGG)A NYV1Q12255 253 aa19.58■□□□□ 0.72
TRN1tP(UGG)A FUN12P39730 1002 aaKnown RBP19.57■□□□□ 0.72
TRN1tP(UGG)A UTP22P53254 1237 aaPredicted RBP19.57■□□□□ 0.72
TRN1tP(UGG)A VPS64Q03944 604 aa19.57■□□□□ 0.72
TRN1tP(UGG)A YFR016CP43597 1233 aaKnown RBP19.56■□□□□ 0.72
TRN1tP(UGG)A SER1P33330 395 aaKnown RBP19.55■□□□□ 0.72
TRN1tP(UGG)A APL2P36000 726 aaPredicted RBP19.55■□□□□ 0.72
TRN1tP(UGG)A YGL082WP53155 381 aa19.53■□□□□ 0.72
TRN1tP(UGG)A ARG8P18544 423 aa19.52■□□□□ 0.72
TRN1tP(UGG)A DAL5P15365 543 aa19.51■□□□□ 0.71
TRN1tP(UGG)A MRP7P12687 371 aa19.5■□□□□ 0.71
TRN1tP(UGG)A YIL092WP40497 633 aa19.5■□□□□ 0.71
TRN1tP(UGG)A TOS1P38288 455 aa19.49■□□□□ 0.71
TRN1tP(UGG)A DNM1P54861 757 aa19.49■□□□□ 0.71
TRN1tP(UGG)A HPC2Q01448 625 aa19.49■□□□□ 0.71
TRN1tP(UGG)A YDR306CQ06640 478 aa19.49■□□□□ 0.71
TRN1tP(UGG)A YPR204WQ08995 1032 aa19.49■□□□□ 0.71
TRN1tP(UGG)A RIX7Q07844 837 aaKnown RBP19.47■□□□□ 0.71
TRN1tP(UGG)A DCD1P06773 312 aa19.46■□□□□ 0.71
TRN1tP(UGG)A RAD2P07276 1031 aa19.46■□□□□ 0.71
TRN1tP(UGG)A SWI1P09547 1314 aa19.46■□□□□ 0.71
TRN1tP(UGG)A NUP133P36161 1157 aa19.45■□□□□ 0.7
TRN1tP(UGG)A CST6P40535 587 aa19.45■□□□□ 0.7
TRN1tP(UGG)A YGR122WP53272 402 aa19.45■□□□□ 0.7
TRN1tP(UGG)A CTI6Q08923 506 aa19.45■□□□□ 0.7
TRN1tP(UGG)A YPP1P46951 817 aa19.44■□□□□ 0.7
TRN1tP(UGG)A NOP8Q08287 484 aaPredicted RBP19.43■□□□□ 0.7
TRN1tP(UGG)A LPD1P09624 499 aaKnown RBP19.42■□□□□ 0.7
TRN1tP(UGG)A RAD24P32641 659 aa19.41■□□□□ 0.7
TRN1tP(UGG)A CSI1Q04368 295 aa19.41■□□□□ 0.7
TRN1tP(UGG)A PKH1Q03407 766 aa19.4■□□□□ 0.7
TRN1tP(UGG)A YLR271WQ06152 274 aa19.39■□□□□ 0.69
TRN1tP(UGG)A YJR008WP47085 338 aa19.37■□□□□ 0.69
TRN1tP(UGG)A RAT1Q02792 1006 aaKnown RBP19.37■□□□□ 0.69
TRN1tP(UGG)A SWC3P31376 625 aa19.36■□□□□ 0.69
TRN1tP(UGG)A TRP5P00931 707 aaKnown RBP19.35■□□□□ 0.69
TRN1tP(UGG)A TFA1P36100 482 aa19.35■□□□□ 0.69
TRN1tP(UGG)A FCP1Q03254 732 aa19.33■□□□□ 0.68
TRN1tP(UGG)A PMD1P32634 1753 aa19.32■□□□□ 0.68
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms