RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W MAK21Q12176 1025 aaKnown RBP3.14□□□□□ -1.91
NUP100YKL068W FAR11P53917 953 aa3.14□□□□□ -1.91
NUP100YKL068W RTS3P53289 263 aa3.13□□□□□ -1.91
NUP100YKL068W SEN54Q02825 467 aaPredicted RBP3.13□□□□□ -1.91
NUP100YKL068W RSF2P46974 1380 aa3.13□□□□□ -1.91
NUP100YKL068W TSC11P40061 1430 aa3.13□□□□□ -1.91
NUP100YKL068W COX6P00427 148 aa3.13□□□□□ -1.91
NUP100YKL068W SWE1P32944 819 aa3.13□□□□□ -1.91
NUP100YKL068W SSF1P38789 453 aaPredicted RBP3.13□□□□□ -1.91
NUP100YKL068W YMR1P47147 688 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
NUP100YKL068W TOR1P35169 2470 aa3.12□□□□□ -1.91
NUP100YKL068W CDC3P32457 520 aaKnown RBP3.12□□□□□ -1.91
NUP100YKL068W ETP1P38748 585 aaKnown RBP3.12□□□□□ -1.91
NUP100YKL068W REF2P42073 533 aaPredicted RBP3.12□□□□□ -1.91
NUP100YKL068W YDR090CQ03193 310 aa3.12□□□□□ -1.91
NUP100YKL068W NOB1Q08444 459 aaKnown RBP3.12□□□□□ -1.91
NUP100YKL068W SNQ2P32568 1501 aaKnown RBP3.12□□□□□ -1.91
NUP100YKL068W SSA2P10592 639 aaKnown RBP3.12□□□□□ -1.91
NUP100YKL068W HEM3P28789 327 aa3.12□□□□□ -1.91
NUP100YKL068W ALD4P46367 519 aaKnown RBP3.12□□□□□ -1.91
NUP100YKL068W PIB1Q06651 286 aa3.12□□□□□ -1.91
NUP100YKL068W HAT1Q12341 374 aa3.12□□□□□ -1.91
NUP100YKL068W SNF2P22082 1703 aa3.12□□□□□ -1.91
NUP100YKL068W TIF1P10081 395 aaKnown RBP3.11□□□□□ -1.91
NUP100YKL068W OCA5P38738 679 aa3.11□□□□□ -1.91
NUP100YKL068W NSR1P27476 414 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
NUP100YKL068W RPL34BP40525 121 aaKnown RBP3.11□□□□□ -1.91
NUP100YKL068W YPR204WQ08995 1032 aa3.11□□□□□ -1.91
NUP100YKL068W UBP14P38237 781 aaKnown RBP3.1□□□□□ -1.91
NUP100YKL068W YML083CQ04526 418 aa3.1□□□□□ -1.91
NUP100YKL068W PTC3P34221 468 aaKnown RBP3.1□□□□□ -1.91
NUP100YKL068W IMH1Q06704 911 aaKnown RBP3.1□□□□□ -1.91
NUP100YKL068W YSP2Q06681 1438 aa3.1□□□□□ -1.91
NUP100YKL068W DBP1P24784 617 aaKnown RBP3.09□□□□□ -1.91
NUP100YKL068W TTI1P36097 1038 aa3.09□□□□□ -1.91
NUP100YKL068W IPL1P38991 367 aa3.09□□□□□ -1.91
NUP100YKL068W CSN12P47130 423 aa3.09□□□□□ -1.92
NUP100YKL068W NST1P53935 1240 aa3.09□□□□□ -1.92
NUP100YKL068W SUB1P54000 292 aaKnown RBP3.09□□□□□ -1.92
NUP100YKL068W DOS2P54858 310 aa3.09□□□□□ -1.92
NUP100YKL068W YMR084WA2P2R3 262 aa3.07□□□□□ -1.92
NUP100YKL068W RTG2P32608 588 aaKnown RBP3.07□□□□□ -1.92
NUP100YKL068W CST6P40535 587 aa3.07□□□□□ -1.92
NUP100YKL068W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
NUP100YKL068W VPS72Q03388 795 aa3.07□□□□□ -1.92
NUP100YKL068W BUD21Q08492 214 aaPredicted RBP3.07□□□□□ -1.92
NUP100YKL068W SOL3P38858 249 aa3.07□□□□□ -1.92
NUP100YKL068W ASF1P32447 279 aa3.06□□□□□ -1.92
NUP100YKL068W SLX5P32828 619 aaKnown RBP3.06□□□□□ -1.92
NUP100YKL068W YNR014WP53719 212 aa3.06□□□□□ -1.92
NUP100YKL068W YAF9P53930 226 aa3.06□□□□□ -1.92
NUP100YKL068W BIO2P32451 375 aa3.06□□□□□ -1.92
NUP100YKL068W MDG1P53885 366 aa3.06□□□□□ -1.92
NUP100YKL068W FRK1Q03002 865 aaPredicted RBP3.06□□□□□ -1.92
NUP100YKL068W YLR326WQ06170 240 aaKnown RBP3.06□□□□□ -1.92
NUP100YKL068W TPO2P53283 614 aa3.06□□□□□ -1.92
NUP100YKL068W PUP1P25043 261 aa3.05□□□□□ -1.92
NUP100YKL068W KTR1P27810 393 aaKnown RBP3.05□□□□□ -1.92
NUP100YKL068W YBL036CP38197 257 aa3.05□□□□□ -1.92
NUP100YKL068W RNH70P53331 553 aa3.05□□□□□ -1.92
NUP100YKL068W YNL108CP53929 270 aa3.05□□□□□ -1.92
NUP100YKL068W YOR238WQ08634 303 aa3.05□□□□□ -1.92
NUP100YKL068W TYW1Q08960 810 aaKnown RBP3.05□□□□□ -1.92
NUP100YKL068W FPR4Q06205 392 aaPredicted RBP3.05□□□□□ -1.92
NUP100YKL068W UBX5Q06682 500 aa3.04□□□□□ -1.92
NUP100YKL068W SAM3Q08986 587 aa3.04□□□□□ -1.92
NUP100YKL068W GIN4Q12263 1142 aa3.04□□□□□ -1.92
NUP100YKL068W MST1P07236 462 aa3.04□□□□□ -1.92
NUP100YKL068W KEX1P09620 729 aa3.04□□□□□ -1.92
NUP100YKL068W VMA1P17255 1071 aaKnown RBP3.04□□□□□ -1.92
NUP100YKL068W DLD1P32891 587 aa3.04□□□□□ -1.92
NUP100YKL068W NMD2P38798 1089 aaKnown RBP3.04□□□□□ -1.92
NUP100YKL068W NNF1P47149 201 aa3.04□□□□□ -1.92
NUP100YKL068W ATE1P16639 503 aa3.03□□□□□ -1.92
NUP100YKL068W PCS60P38137 543 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
NUP100YKL068W GAP1P19145 602 aaPredicted RBP3.03□□□□□ -1.92
NUP100YKL068W TSR4P25040 408 aa3.03□□□□□ -1.92
NUP100YKL068W PPG1P32838 368 aa3.03□□□□□ -1.92
NUP100YKL068W TGL3P40308 642 aa3.03□□□□□ -1.92
NUP100YKL068W YGR273CP53329 174 aa3.03□□□□□ -1.92
NUP100YKL068W YBL113CQ7M4S9 792 aa3.03□□□□□ -1.92
NUP100YKL068W PDR1P12383 1068 aa3.02□□□□□ -1.93
NUP100YKL068W PSE1P32337 1089 aaKnown RBP3.02□□□□□ -1.93
NUP100YKL068W TOM20P35180 183 aa3.02□□□□□ -1.93
NUP100YKL068W TIF4632P39936 914 aaKnown RBP3.02□□□□□ -1.93
NUP100YKL068W OSW7P43611 510 aa3.02□□□□□ -1.93
NUP100YKL068W GUT1P32190 709 aa3.02□□□□□ -1.93
NUP100YKL068W ORC6P38826 435 aa3.02□□□□□ -1.93
NUP100YKL068W STM1P39015 273 aaKnown RBP3.02□□□□□ -1.93
NUP100YKL068W JIP5Q06214 492 aaPredicted RBP3.02□□□□□ -1.93
NUP100YKL068W VHR2P40041 505 aa3.02□□□□□ -1.93
NUP100YKL068W POL32P47110 350 aa3.02□□□□□ -1.93
NUP100YKL068W NCS6P53088 359 aa3.01□□□□□ -1.93
NUP100YKL068W RRP15Q06511 250 aaPredicted RBP3.01□□□□□ -1.93
NUP100YKL068W CAT8P39113 1433 aa3.01□□□□□ -1.93
NUP100YKL068W ENO1P00924 437 aaKnown RBP3.01□□□□□ -1.93
NUP100YKL068W ERP5P38819 212 aa3.01□□□□□ -1.93
NUP100YKL068W OYE2Q03558 400 aaKnown RBP3.01□□□□□ -1.93
NUP100YKL068W YOL098CQ12496 1037 aa3.01□□□□□ -1.93
NUP100YKL068W SEC20P28791 383 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms