RNA–Protein interactions for RNA: YDR009W

GAL3, Transcript of Transcriptional regulator, yeast

Gene GAL3, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAL3	YDR009W	NTH2	P35172	780 aa		11.58	□□□□□ -0.56
GAL3	YDR009W	CTF4	Q01454	927 aa		11.57	□□□□□ -0.56
GAL3	YDR009W	AOS1	Q06624	347 aa		11.57	□□□□□ -0.56
GAL3	YDR009W	YDL144C	Q07589	356 aa		11.57	□□□□□ -0.56
GAL3	YDR009W	EDE1	P34216	1381 aa		11.57	□□□□□ -0.56
GAL3	YDR009W	IOC4	Q04213	475 aa		11.56	□□□□□ -0.56
GAL3	YDR009W	THI22	Q06490	572 aa		11.55	□□□□□ -0.56
GAL3	YDR009W	YBP2	P53169	641 aa		11.53	□□□□□ -0.56
GAL3	YDR009W	YBL086C	P38177	466 aa		11.52	□□□□□ -0.57
GAL3	YDR009W	CTH1	P47976	325 aa		11.51	□□□□□ -0.57
GAL3	YDR009W	ALE1	Q08548	619 aa		11.51	□□□□□ -0.57
GAL3	YDR009W	RTT109	Q07794	436 aa		11.5	□□□□□ -0.57
GAL3	YDR009W	TUM1	Q08686	304 aa	Known RBP	11.5	□□□□□ -0.57
GAL3	YDR009W	KCC4	P25389	1037 aa		11.5	□□□□□ -0.57
GAL3	YDR009W	YNL050C	P53952	270 aa		11.5	□□□□□ -0.57
GAL3	YDR009W	MSB4	Q12317	492 aa		11.5	□□□□□ -0.57
GAL3	YDR009W	GRX1	P25373	110 aa	Known RBP	11.49	□□□□□ -0.57
GAL3	YDR009W	TPD3	P31383	635 aa		11.48	□□□□□ -0.57
GAL3	YDR009W	SAP155	P43612	1002 aa		11.47	□□□□□ -0.57
GAL3	YDR009W	YBR287W	P38355	427 aa		11.46	□□□□□ -0.57
GAL3	YDR009W	ZDS1	P50111	915 aa	Known RBP	11.46	□□□□□ -0.57
GAL3	YDR009W	HEF3	P53978	1044 aa	Known RBP	11.46	□□□□□ -0.57
GAL3	YDR009W	GRE2	Q12068	342 aa	Known RBP	11.46	□□□□□ -0.57
GAL3	YDR009W	SSA2	P10592	639 aa	Known RBP	11.45	□□□□□ -0.58
GAL3	YDR009W	ALD2	P47771	506 aa		11.45	□□□□□ -0.58
GAL3	YDR009W	RMT2	Q03305	412 aa		11.45	□□□□□ -0.58
GAL3	YDR009W	SUI2	P20459	304 aa	Known RBP	11.45	□□□□□ -0.58
GAL3	YDR009W	RRT14	P40470	206 aa		11.45	□□□□□ -0.58
GAL3	YDR009W	UGA3	P26370	528 aa		11.44	□□□□□ -0.58
GAL3	YDR009W	UGA2	P38067	497 aa		11.43	□□□□□ -0.58
GAL3	YDR009W	COQ4	O13525	335 aa		11.42	□□□□□ -0.58
GAL3	YDR009W	RAD4	P14736	754 aa		11.42	□□□□□ -0.58
GAL3	YDR009W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
GAL3	YDR009W	NSE3	Q05541	303 aa		11.42	□□□□□ -0.58
GAL3	YDR009W	RPP0	P05317	312 aa	Known RBP	11.41	□□□□□ -0.58
GAL3	YDR009W	GTT3	P39996	337 aa		11.41	□□□□□ -0.58
GAL3	YDR009W	MAM1	P40065	302 aa		11.41	□□□□□ -0.58
GAL3	YDR009W	BMS1	Q08965	1183 aa	Known RBP	11.41	□□□□□ -0.58
GAL3	YDR009W	NOP53	Q12080	455 aa	Known RBP	11.41	□□□□□ -0.58
GAL3	YDR009W	BDF1	P35817	686 aa		11.41	□□□□□ -0.58
GAL3	YDR009W	VPS27	P40343	622 aa	Known RBP	11.41	□□□□□ -0.58
GAL3	YDR009W	RPG1	P38249	964 aa	Known RBP	11.4	□□□□□ -0.58
GAL3	YDR009W	GYP7	P48365	746 aa		11.4	□□□□□ -0.58
GAL3	YDR009W	BUG1	Q12191	341 aa		11.4	□□□□□ -0.58
GAL3	YDR009W	PRS1	P32895	427 aa	Known RBP	11.39	□□□□□ -0.59
GAL3	YDR009W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.39	□□□□□ -0.59	not detected
GAL3	YDR009W	ZDS2	P54786	942 aa		11.38	□□□□□ -0.59
GAL3	YDR009W	TEA1	P47988	759 aa		11.37	□□□□□ -0.59
GAL3	YDR009W	CDC45	Q08032	650 aa		11.37	□□□□□ -0.59
GAL3	YDR009W	RVB2	Q12464	471 aa	Known RBP	11.37	□□□□□ -0.59
GAL3	YDR009W	LYS2	P07702	1392 aa		11.36	□□□□□ -0.59
GAL3	YDR009W	NYV1	Q12255	253 aa		11.36	□□□□□ -0.59
GAL3	YDR009W	ALD3	P54114	506 aa		11.35	□□□□□ -0.59
GAL3	YDR009W	SRT1	Q03175	343 aa		11.35	□□□□□ -0.59
GAL3	YDR009W	UTP10	P42945	1769 aa	Known RBP	11.34	□□□□□ -0.59
GAL3	YDR009W	SER1	P33330	395 aa	Known RBP	11.33	□□□□□ -0.6
GAL3	YDR009W	APL2	P36000	726 aa	Predicted RBP	11.33	□□□□□ -0.6
GAL3	YDR009W	YGL082W	P53155	381 aa		11.33	□□□□□ -0.6
GAL3	YDR009W	SSP2	Q08646	371 aa		11.33	□□□□□ -0.6
GAL3	YDR009W	PHM7	Q12252	991 aa		11.33	□□□□□ -0.6
GAL3	YDR009W	TOS1	P38288	455 aa		11.33	□□□□□ -0.6
GAL3	YDR009W	UTP22	P53254	1237 aa	Predicted RBP	11.33	□□□□□ -0.6
GAL3	YDR009W	VPS64	Q03944	604 aa		11.33	□□□□□ -0.6
GAL3	YDR009W	RIX7	Q07844	837 aa	Known RBP	11.33	□□□□□ -0.6
GAL3	YDR009W	FUN12	P39730	1002 aa	Known RBP	11.32	□□□□□ -0.6
GAL3	YDR009W	YOL057W	Q08225	711 aa		11.32	□□□□□ -0.6
GAL3	YDR009W	CTI6	Q08923	506 aa		11.32	□□□□□ -0.6
GAL3	YDR009W	MDG1	P53885	366 aa		11.31	□□□□□ -0.6
GAL3	YDR009W	HPC2	Q01448	625 aa		11.31	□□□□□ -0.6
GAL3	YDR009W	DCD1	P06773	312 aa		11.3	□□□□□ -0.6
GAL3	YDR009W	ARG8	P18544	423 aa		11.3	□□□□□ -0.6
GAL3	YDR009W	YPR204W	Q08995	1032 aa		11.3	□□□□□ -0.6
GAL3	YDR009W	YFR016C	P43597	1233 aa	Known RBP	11.29	□□□□□ -0.6
GAL3	YDR009W	YGR122W	P53272	402 aa		11.27	□□□□□ -0.61
GAL3	YDR009W	DAL5	P15365	543 aa		11.25	□□□□□ -0.61
GAL3	YDR009W	YDR306C	Q06640	478 aa		11.25	□□□□□ -0.61
GAL3	YDR009W	SWI1	P09547	1314 aa		11.25	□□□□□ -0.61
GAL3	YDR009W	LPD1	P09624	499 aa	Known RBP	11.24	□□□□□ -0.61
GAL3	YDR009W	MRP7	P12687	371 aa		11.24	□□□□□ -0.61
GAL3	YDR009W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.24	□□□□□ -0.61	not detected
GAL3	YDR009W	NUP133	P36161	1157 aa		11.24	□□□□□ -0.61
GAL3	YDR009W	YIL092W	P40497	633 aa		11.23	□□□□□ -0.61
GAL3	YDR009W	EAF6	P47128	113 aa		11.23	□□□□□ -0.61
GAL3	YDR009W	FAP1	P53971	965 aa		11.23	□□□□□ -0.61
GAL3	YDR009W	DNM1	P54861	757 aa		11.23	□□□□□ -0.61
GAL3	YDR009W	MAK21	Q12176	1025 aa	Known RBP	11.23	□□□□□ -0.61
GAL3	YDR009W	SWC3	P31376	625 aa		11.22	□□□□□ -0.61
GAL3	YDR009W	RAD24	P32641	659 aa		11.22	□□□□□ -0.61
GAL3	YDR009W	YRB30	P53107	440 aa	Predicted RBP	11.22	□□□□□ -0.61
GAL3	YDR009W	CST6	P40535	587 aa		11.21	□□□□□ -0.61
GAL3	YDR009W	FCP1	Q03254	732 aa		11.21	□□□□□ -0.61
GAL3	YDR009W	PKH1	Q03407	766 aa		11.21	□□□□□ -0.61
GAL3	YDR009W	MSN5	P52918	1224 aa		11.2	□□□□□ -0.62
GAL3	YDR009W	YLR271W	Q06152	274 aa		11.2	□□□□□ -0.62
GAL3	YDR009W	YPP1	P46951	817 aa		11.2	□□□□□ -0.62
GAL3	YDR009W	RAT1	Q02792	1006 aa	Known RBP	11.2	□□□□□ -0.62
GAL3	YDR009W	CSI1	Q04368	295 aa		11.2	□□□□□ -0.62
GAL3	YDR009W	NOP8	Q08287	484 aa	Predicted RBP	11.18	□□□□□ -0.62
GAL3	YDR009W	PMD1	P32634	1753 aa		11.18	□□□□□ -0.62
GAL3	YDR009W	RAD2	P07276	1031 aa		11.16	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms