RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 SENP3-EIF4A1A0A087X0R7 540 aa8.23□□□□□ -1.09
PDE4D-228ENST00000636120 RWDD1Q9H446 243 aaPredicted RBP8.23□□□□□ -1.09
PDE4D-228ENST00000636120 PRG4Q92954 1404 aaPredicted RBP8.23□□□□□ -1.09
PDE4D-228ENST00000636120 GOLGA2Q08379 1002 aa8.23□□□□□ -1.09
PDE4D-228ENST00000636120 HSP90AB1P08238 724 aaKnown RBP8.22□□□□□ -1.09
PDE4D-228ENST00000636120 MAP3K1Q13233 1512 aa8.22□□□□□ -1.09
PDE4D-228ENST00000636120 TRIM44Q96DX7 344 aaPredicted RBP8.22□□□□□ -1.09
PDE4D-228ENST00000636120 TCERG1O14776 1098 aaKnown RBP8.22□□□□□ -1.09
PDE4D-228ENST00000636120 HSCBQ8IWL3 235 aa8.22□□□□□ -1.09
PDE4D-228ENST00000636120 ARXQ96QS3 562 aa8.21□□□□□ -1.09
PDE4D-228ENST00000636120 CGNL1Q0VF96 1302 aa8.21□□□□□ -1.1
PDE4D-228ENST00000636120 ST20-MTHFSA0A0A6YYL1 179 aa8.21□□□□□ -1.1
PDE4D-228ENST00000636120 NGEFQ8N5V2 710 aa8.21□□□□□ -1.1
PDE4D-228ENST00000636120 TROQ12816 1431 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-228ENST00000636120 ZRSR1Q15695 479 aaKnown RBP8.21□□□□□ -1.1
PDE4D-228ENST00000636120 HDAC5Q9UQL6 1122 aa8.21□□□□□ -1.1
PDE4D-228ENST00000636120 KIAA0586Q9BVV6 1533 aa8.21□□□□□ -1.1
PDE4D-228ENST00000636120 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.21□□□□□ -1.1
PDE4D-228ENST00000636120 PTMSP20962 102 aa8.2□□□□□ -1.1
PDE4D-228ENST00000636120 PCF11O94913 1555 aaKnown RBP8.2□□□□□ -1.1
PDE4D-228ENST00000636120 HFM1A2PYH4 1435 aa8.19□□□□□ -1.1
PDE4D-228ENST00000636120 PANK3Q9H999 370 aa8.19□□□□□ -1.1
PDE4D-228ENST00000636120 CNTLNQ9NXG0 1405 aa8.19□□□□□ -1.1
PDE4D-228ENST00000636120 PAK3O75914 559 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-228ENST00000636120 ZBED9Q6R2W3 1325 aa8.19□□□□□ -1.1
PDE4D-228ENST00000636120 CENPJQ9HC77 1338 aaPredicted RBP8.18□□□□□ -1.1
PDE4D-228ENST00000636120 GLIPR1L2Q4G1C9 344 aa8.18□□□□□ -1.1
PDE4D-228ENST00000636120 C9orf84Q5VXU9 1444 aa8.18□□□□□ -1.1
PDE4D-228ENST00000636120 PRKRIP1Q9H875 184 aaPredicted RBP8.18□□□□□ -1.1
PDE4D-228ENST00000636120 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
PDE4D-228ENST00000636120 ITPRIPQ8IWB1 547 aa8.18□□□□□ -1.1
PDE4D-228ENST00000636120 MAGI1Q96QZ7 1491 aaPredicted RBP8.18□□□□□ -1.1
PDE4D-228ENST00000636120 SOX12O15370 315 aa8.18□□□□□ -1.1
PDE4D-228ENST00000636120 STK31Q9BXU1 1019 aa8.18□□□□□ -1.1
PDE4D-228ENST00000636120 CCDC7Q96M83 1385 aa8.17□□□□□ -1.1
PDE4D-228ENST00000636120 KIF14Q15058 1648 aa8.17□□□□□ -1.1
PDE4D-228ENST00000636120 KCNJ4P48050 445 aa8.17□□□□□ -1.1
PDE4D-228ENST00000636120 DAPK1P53355 1430 aa8.17□□□□□ -1.1
PDE4D-228ENST00000636120 NGDNQ8NEJ9 315 aaKnown RBP8.17□□□□□ -1.1
PDE4D-228ENST00000636120 CDK11BP21127 795 aaKnown RBP8.17□□□□□ -1.1
PDE4D-228ENST00000636120 EPRSP07814 1512 aaKnown RBP8.17□□□□□ -1.1
PDE4D-228ENST00000636120 KIAA1107Q9UPP5 1409 aa8.16□□□□□ -1.1
PDE4D-228ENST00000636120 NPHP1O15259 732 aa8.16□□□□□ -1.1
PDE4D-228ENST00000636120 SMC4Q9NTJ3 1288 aa8.16□□□□□ -1.1
PDE4D-228ENST00000636120 E9PSI1 815 aa8.16□□□□□ -1.1
PDE4D-228ENST00000636120 HMMRO75330 724 aa8.16□□□□□ -1.1
PDE4D-228ENST00000636120 ROCK1Q13464 1354 aa8.16□□□□□ -1.1
PDE4D-228ENST00000636120 SCAPERQ9BY12 1400 aa8.16□□□□□ -1.1
PDE4D-228ENST00000636120 ZNF644Q9H582 1327 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-228ENST00000636120 PTPN23Q9H3S7 1636 aa8.16□□□□□ -1.1
PDE4D-228ENST00000636120 COG3Q96JB2 828 aa8.15□□□□□ -1.1
PDE4D-228ENST00000636120 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
PDE4D-228ENST00000636120 FGD1P98174 961 aa8.15□□□□□ -1.1
PDE4D-228ENST00000636120 GOLGA6L6A8MZA4 724 aa8.15□□□□□ -1.1
PDE4D-228ENST00000636120 GPATCH3Q96I76 525 aa8.15□□□□□ -1.1
PDE4D-228ENST00000636120 AMPHP49418 695 aa8.15□□□□□ -1.11
PDE4D-228ENST00000636120 NUTM2DQ5VT03 806 aaPredicted RBP8.15□□□□□ -1.11
PDE4D-228ENST00000636120 THOC2Q8NI27 1593 aaKnown RBP8.14□□□□□ -1.11
PDE4D-228ENST00000636120 PTMAP06454 111 aaKnown RBP8.14□□□□□ -1.11
PDE4D-228ENST00000636120 CCDC146Q8IYE0 955 aa8.14□□□□□ -1.11
PDE4D-228ENST00000636120 RBM19Q9Y4C8 960 aaKnown RBP8.14□□□□□ -1.11
PDE4D-228ENST00000636120 L1TD1Q5T7N2 865 aaKnown RBP8.14□□□□□ -1.11
PDE4D-228ENST00000636120 CYB5RLQ6IPT4 315 aa8.13□□□□□ -1.11
PDE4D-228ENST00000636120 KIAA1211Q6ZU35 1233 aa8.13□□□□□ -1.11
PDE4D-228ENST00000636120 GRIN2AQ12879 1464 aa8.13□□□□□ -1.11
PDE4D-228ENST00000636120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.13□□□□□ -1.112e-6■■□□□ 12.3
PDE4D-228ENST00000636120 CTTNBP2Q8WZ74 1663 aa8.12□□□□□ -1.11
PDE4D-228ENST00000636120 BRD4O60885 1362 aaPredicted RBP8.12□□□□□ -1.11
PDE4D-228ENST00000636120 CENPQQ7L2Z9 268 aaPredicted RBP8.12□□□□□ -1.11
PDE4D-228ENST00000636120 KIF7Q2M1P5 1343 aa8.12□□□□□ -1.11
PDE4D-228ENST00000636120 FAM69CQ0P6D2 419 aa8.12□□□□□ -1.11
PDE4D-228ENST00000636120 CDK13Q14004 1512 aaKnown RBP8.11□□□□□ -1.11
PDE4D-228ENST00000636120 CCDC141Q6ZP82 1450 aa8.11□□□□□ -1.11
PDE4D-228ENST00000636120 GBP4Q96PP9 640 aa8.11□□□□□ -1.11
PDE4D-228ENST00000636120 RRP1P56182 461 aaKnown RBP8.11□□□□□ -1.11
PDE4D-228ENST00000636120 WASHC2AQ641Q2 1341 aa8.11□□□□□ -1.11
PDE4D-228ENST00000636120 CAMSAP2Q08AD1 1489 aa8.11□□□□□ -1.11
PDE4D-228ENST00000636120 URB2Q14146 1524 aaKnown RBP8.1□□□□□ -1.11
PDE4D-228ENST00000636120 AAMPQ13685 434 aa8.1□□□□□ -1.11
PDE4D-228ENST00000636120 GOLGA6L4A6NEF3 574 aa8.1□□□□□ -1.11
PDE4D-228ENST00000636120 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
PDE4D-228ENST00000636120 ZKSCAN2Q63HK3 967 aa8.09□□□□□ -1.11
PDE4D-228ENST00000636120 RUNDC1Q96C34 613 aa8.09□□□□□ -1.11
PDE4D-228ENST00000636120 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
PDE4D-228ENST00000636120 ITSN2Q9NZM3 1697 aa8.09□□□□□ -1.11
PDE4D-228ENST00000636120 NRDCO43847 1150 aa8.09□□□□□ -1.11
PDE4D-228ENST00000636120 HTATSF1O43719 755 aaKnown RBP8.09□□□□□ -1.12
PDE4D-228ENST00000636120 RPGRIP1LQ68CZ1 1315 aa8.08□□□□□ -1.12
PDE4D-228ENST00000636120 C1orf141Q5JVX7 400 aa8.08□□□□□ -1.12
PDE4D-228ENST00000636120 NAP1L2Q9ULW6 460 aaPredicted RBP8.08□□□□□ -1.12
PDE4D-228ENST00000636120 IPO9Q96P70 1041 aaKnown RBP8.07□□□□□ -1.12
PDE4D-228ENST00000636120 NAIPQ13075 1403 aa8.06□□□□□ -1.12
PDE4D-228ENST00000636120 KIF21AQ7Z4S6 1674 aa8.06□□□□□ -1.12
PDE4D-228ENST00000636120 CSPP1Q1MSJ5 1256 aa8.06□□□□□ -1.12
PDE4D-228ENST00000636120 DDX19BQ9UMR2 479 aa8.06□□□□□ -1.12
PDE4D-228ENST00000636120 RAPGEF6Q8TEU7 1601 aa8.06□□□□□ -1.12
PDE4D-228ENST00000636120 SYAP1Q96A49 352 aaPredicted RBP8.06□□□□□ -1.12
PDE4D-228ENST00000636120 DNTTIP2Q5QJE6 756 aaKnown RBP8.05□□□□□ -1.12
PDE4D-228ENST00000636120 APBB1O00213 710 aa8.05□□□□□ -1.12
PDE4D-228ENST00000636120 AKNAQ7Z591 1439 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms