RNA–Protein interactions for RNA: ENST00000622082.4

NUCB2-220, Transcript of nucleobindin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NUCB2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-220ENST00000622082 DOK7Q18PE1 504 aa13.08□□□□□ -0.31
NUCB2-220ENST00000622082 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
NUCB2-220ENST00000622082 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
NUCB2-220ENST00000622082 FOSBP53539 338 aa13.06□□□□□ -0.32
NUCB2-220ENST00000622082 CERKQ8TCT0 537 aa13.05□□□□□ -0.32
NUCB2-220ENST00000622082 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
NUCB2-220ENST00000622082 ZDHHC16Q969W1 377 aa13.03□□□□□ -0.32
NUCB2-220ENST00000622082 NUDT7P0C024 238 aa13.02□□□□□ -0.33
NUCB2-220ENST00000622082 ARSIQ5FYB1 569 aa13.02□□□□□ -0.33
NUCB2-220ENST00000622082 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.33
NUCB2-220ENST00000622082 ZSWIM6Q9HCJ5 1215 aa13.02□□□□□ -0.33
NUCB2-220ENST00000622082 PLEKHG3A1L390 1219 aa13.01□□□□□ -0.33
NUCB2-220ENST00000622082 POTEJP0CG39 1038 aa13□□□□□ -0.33
NUCB2-220ENST00000622082 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
NUCB2-220ENST00000622082 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
NUCB2-220ENST00000622082 SCUBE2Q9NQ36 999 aa13□□□□□ -0.33
NUCB2-220ENST00000622082 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
NUCB2-220ENST00000622082 CLCN1P35523 988 aa12.99□□□□□ -0.33
NUCB2-220ENST00000622082 ZNF710Q8N1W2 664 aa12.98□□□□□ -0.33
NUCB2-220ENST00000622082 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.339e-6■□□□□ 10.6
NUCB2-220ENST00000622082 OATP04181 439 aa12.97□□□□□ -0.33
NUCB2-220ENST00000622082 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
NUCB2-220ENST00000622082 GPR153Q6NV75 609 aa12.95□□□□□ -0.34
NUCB2-220ENST00000622082 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
NUCB2-220ENST00000622082 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
NUCB2-220ENST00000622082 REPIN1Q9BWE0 567 aaKnown RBP12.94□□□□□ -0.34
NUCB2-220ENST00000622082 ADAM33Q9BZ11 813 aa12.94□□□□□ -0.34
NUCB2-220ENST00000622082 MS4A1P11836 297 aa12.94□□□□□ -0.34
NUCB2-220ENST00000622082 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
NUCB2-220ENST00000622082 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
NUCB2-220ENST00000622082 GOPCQ9HD26 462 aa12.94□□□□□ -0.34
NUCB2-220ENST00000622082 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
NUCB2-220ENST00000622082 PHOX2BQ99453 314 aa12.92□□□□□ -0.34
NUCB2-220ENST00000622082 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
NUCB2-220ENST00000622082 METTL3Q86U44 580 aaKnown RBP12.91□□□□□ -0.34
NUCB2-220ENST00000622082 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
NUCB2-220ENST00000622082 SSTR3P32745 418 aaPredicted RBP12.9□□□□□ -0.34
NUCB2-220ENST00000622082 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
NUCB2-220ENST00000622082 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
NUCB2-220ENST00000622082 PRSS12P56730 875 aa12.89□□□□□ -0.35
NUCB2-220ENST00000622082 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
NUCB2-220ENST00000622082 TTC13Q8NBP0 860 aa12.89□□□□□ -0.35
NUCB2-220ENST00000622082 PXYLP1Q8TE99 480 aa12.88□□□□□ -0.35
NUCB2-220ENST00000622082 PCMTD1Q96MG8 357 aaPredicted RBP12.88□□□□□ -0.35
NUCB2-220ENST00000622082 SNPHO15079 494 aa12.87□□□□□ -0.35
NUCB2-220ENST00000622082 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
NUCB2-220ENST00000622082 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
NUCB2-220ENST00000622082 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
NUCB2-220ENST00000622082 FAM217BQ9NTX9 383 aaPredicted RBP12.84□□□□□ -0.35
NUCB2-220ENST00000622082 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
NUCB2-220ENST00000622082 NLRP7Q8WX94 980 aa12.82□□□□□ -0.36
NUCB2-220ENST00000622082 BEGAINQ9BUH8 593 aa12.82□□□□□ -0.36
NUCB2-220ENST00000622082 SH3D19Q5HYK7 790 aa12.81□□□□□ -0.36
NUCB2-220ENST00000622082 ZMYND15Q9H091 742 aa12.81□□□□□ -0.36
NUCB2-220ENST00000622082 SUPT5HO00267 1087 aaKnown RBP12.81□□□□□ -0.36
NUCB2-220ENST00000622082 PTPREP23469 700 aa12.81□□□□□ -0.36
NUCB2-220ENST00000622082 HOXB1P14653 301 aaPredicted RBP12.79□□□□□ -0.36
NUCB2-220ENST00000622082 COL9A1P20849 921 aa12.79□□□□□ -0.36
NUCB2-220ENST00000622082 FLIIQ13045 1269 aa12.79□□□□□ -0.36
NUCB2-220ENST00000622082 SKIV2LQ15477 1246 aaKnown RBP12.79□□□□□ -0.36
NUCB2-220ENST00000622082 PPP1R3GB7ZBB8 358 aa12.78□□□□□ -0.36
NUCB2-220ENST00000622082 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
NUCB2-220ENST00000622082 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
NUCB2-220ENST00000622082 ARXQ96QS3 562 aa12.75□□□□□ -0.37
NUCB2-220ENST00000622082 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
NUCB2-220ENST00000622082 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
NUCB2-220ENST00000622082 EYA1Q99502 592 aa12.74□□□□□ -0.37
NUCB2-220ENST00000622082 PACS2Q86VP3 889 aa12.73□□□□□ -0.37
NUCB2-220ENST00000622082 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
NUCB2-220ENST00000622082 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
NUCB2-220ENST00000622082 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
NUCB2-220ENST00000622082 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
NUCB2-220ENST00000622082 KCNH8Q96L42 1107 aa12.71□□□□□ -0.37
NUCB2-220ENST00000622082 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
NUCB2-220ENST00000622082 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
NUCB2-220ENST00000622082 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
NUCB2-220ENST00000622082 TATDN2Q93075 761 aa12.69□□□□□ -0.38
NUCB2-220ENST00000622082 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
NUCB2-220ENST00000622082 DNAJB2P25686 324 aa12.69□□□□□ -0.38
NUCB2-220ENST00000622082 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
NUCB2-220ENST00000622082 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
NUCB2-220ENST00000622082 PROCA1Q8NCQ7 364 aaPredicted RBP12.68□□□□□ -0.38
NUCB2-220ENST00000622082 TBC1D2Q9BYX2 928 aa12.68□□□□□ -0.38
NUCB2-220ENST00000622082 KCNK17Q96T54 332 aa12.67□□□□□ -0.38
NUCB2-220ENST00000622082 CLK2P49760 499 aaKnown RBP12.65□□□□□ -0.38
NUCB2-220ENST00000622082 CD46P15529 392 aa12.64□□□□□ -0.39
NUCB2-220ENST00000622082 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
NUCB2-220ENST00000622082 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
NUCB2-220ENST00000622082 PROX2Q3B8N5 592 aa12.63□□□□□ -0.39
NUCB2-220ENST00000622082 TMEM134Q9H6X4 195 aa12.63□□□□□ -0.39
NUCB2-220ENST00000622082 NUTM1Q86Y26 1132 aa12.62□□□□□ -0.39
NUCB2-220ENST00000622082 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
NUCB2-220ENST00000622082 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.62□□□□□ -0.39
NUCB2-220ENST00000622082 SPIRE2Q8WWL2 714 aa12.61□□□□□ -0.39
NUCB2-220ENST00000622082 HOMEZQ8IX15 550 aa12.6□□□□□ -0.39
NUCB2-220ENST00000622082 SMAPO00193 183 aa12.59□□□□□ -0.39
NUCB2-220ENST00000622082 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
NUCB2-220ENST00000622082 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
NUCB2-220ENST00000622082 RIC3Q7Z5B4 369 aa12.58□□□□□ -0.4
NUCB2-220ENST00000622082 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms