RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 EVI5O60447 810 aa7.08□□□□□ -1.28
LRRC39-204ENST00000620882 NLRP7Q8WX94 980 aa7.08□□□□□ -1.28
LRRC39-204ENST00000620882 SPNS2Q8IVW8 549 aa7.07□□□□□ -1.28
LRRC39-204ENST00000620882 FAM161AQ3B820 660 aa7.06□□□□□ -1.28
LRRC39-204ENST00000620882 CCDC82Q8N4S0 544 aa7.06□□□□□ -1.28
LRRC39-204ENST00000620882 GOPCQ9HD26 462 aa7.06□□□□□ -1.28
LRRC39-204ENST00000620882 MCM6Q14566 821 aa7.05□□□□□ -1.28
LRRC39-204ENST00000620882 TMUB1Q9BVT8 246 aa7.05□□□□□ -1.28
LRRC39-204ENST00000620882 COLQQ9Y215 455 aaPredicted RBP7.05□□□□□ -1.28
LRRC39-204ENST00000620882 FLIIQ13045 1269 aa7.04□□□□□ -1.28
LRRC39-204ENST00000620882 ASTLQ6HA08 431 aaPredicted RBP7.04□□□□□ -1.28
LRRC39-204ENST00000620882 TSR1Q2NL82 804 aaKnown RBP7.04□□□□□ -1.28
LRRC39-204ENST00000620882 POM121Q96HA1 1249 aa7.04□□□□□ -1.28
LRRC39-204ENST00000620882 MDM2Q00987 491 aaPredicted RBP7.03□□□□□ -1.28
LRRC39-204ENST00000620882 FBXO31Q5XUX0 539 aaPredicted RBP7.02□□□□□ -1.29
LRRC39-204ENST00000620882 PELP1Q8IZL8 1130 aaKnown RBP7.02□□□□□ -1.29
LRRC39-204ENST00000620882 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
LRRC39-204ENST00000620882 TRAK2O60296 914 aa7.02□□□□□ -1.29
LRRC39-204ENST00000620882 EN1Q05925 392 aaPredicted RBP7□□□□□ -1.29
LRRC39-204ENST00000620882 SH3D19Q5HYK7 790 aa7□□□□□ -1.29
LRRC39-204ENST00000620882 IER5LQ5T953 404 aa7□□□□□ -1.29
LRRC39-204ENST00000620882 RBM33Q96EV2 1170 aaKnown RBP7□□□□□ -1.29
LRRC39-204ENST00000620882 POTEFA5A3E0 1075 aa7□□□□□ -1.29
LRRC39-204ENST00000620882 PLCG2P16885 1265 aa7□□□□□ -1.29
LRRC39-204ENST00000620882 NECTIN2Q92692 538 aa7□□□□□ -1.29
LRRC39-204ENST00000620882 PCMTD1Q96MG8 357 aaPredicted RBP7□□□□□ -1.29
LRRC39-204ENST00000620882 A6NJR5 290 aa6.99□□□□□ -1.29
LRRC39-204ENST00000620882 G3V3G9 751 aa6.99□□□□□ -1.29
LRRC39-204ENST00000620882 MAP3K7O43318 606 aa6.99□□□□□ -1.29
LRRC39-204ENST00000620882 TBC1D12O60347 775 aa6.99□□□□□ -1.29
LRRC39-204ENST00000620882 PTCD2Q8WV60 388 aaKnown RBP6.99□□□□□ -1.29
LRRC39-204ENST00000620882 ANO8Q9HCE9 1232 aaPredicted RBP6.99□□□□□ -1.29
LRRC39-204ENST00000620882 POLR3EQ9NVU0 708 aa6.99□□□□□ -1.29
LRRC39-204ENST00000620882 PCDHGA10Q9Y5H3 936 aa6.99□□□□□ -1.29
LRRC39-204ENST00000620882 SSTR3P32745 418 aaPredicted RBP6.98□□□□□ -1.29
LRRC39-204ENST00000620882 BEGAINQ9BUH8 593 aa6.98□□□□□ -1.29
LRRC39-204ENST00000620882 GPCPD1Q9NPB8 672 aa6.98□□□□□ -1.29
LRRC39-204ENST00000620882 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
LRRC39-204ENST00000620882 FNBP4Q8N3X1 1017 aaPredicted RBP6.97□□□□□ -1.29
LRRC39-204ENST00000620882 CLCN1P35523 988 aa6.96□□□□□ -1.3
LRRC39-204ENST00000620882 METTL3Q86U44 580 aaKnown RBP6.96□□□□□ -1.3
LRRC39-204ENST00000620882 FAM217BQ9NTX9 383 aaPredicted RBP6.95□□□□□ -1.3
LRRC39-204ENST00000620882 SKIV2LQ15477 1246 aaKnown RBP6.95□□□□□ -1.3
LRRC39-204ENST00000620882 MAMSTRQ6ZN01 415 aa6.95□□□□□ -1.3
LRRC39-204ENST00000620882 PROSER2Q86WR7 435 aaPredicted RBP6.95□□□□□ -1.3
LRRC39-204ENST00000620882 L3MBTL3Q96JM7 780 aaPredicted RBP6.95□□□□□ -1.3
LRRC39-204ENST00000620882 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.95□□□□□ -1.3
LRRC39-204ENST00000620882 PHF14O94880 888 aa6.94□□□□□ -1.3
LRRC39-204ENST00000620882 MYSM1Q5VVJ2 828 aa6.94□□□□□ -1.3
LRRC39-204ENST00000620882 PADI6Q6TGC4 694 aa6.93□□□□□ -1.3
LRRC39-204ENST00000620882 SNRKQ9NRH2 765 aa6.93□□□□□ -1.3
LRRC39-204ENST00000620882 SLAIN1Q8ND83 568 aa6.92□□□□□ -1.3
LRRC39-204ENST00000620882 KDM4FA0A1W2PPD8 638 aa6.91□□□□□ -1.3
LRRC39-204ENST00000620882 SLC34A2O95436 690 aa6.91□□□□□ -1.3
LRRC39-204ENST00000620882 SEC24BO95487 1268 aa6.91□□□□□ -1.3
LRRC39-204ENST00000620882 PXYLP1Q8TE99 480 aa6.91□□□□□ -1.3
LRRC39-204ENST00000620882 COG6Q9Y2V7 657 aa6.91□□□□□ -1.3
LRRC39-204ENST00000620882 ADGRG1Q9Y653 693 aa6.91□□□□□ -1.3
LRRC39-204ENST00000620882 PDIA4P13667 645 aaKnown RBP6.9□□□□□ -1.3
LRRC39-204ENST00000620882 LIMD1Q9UGP4 676 aa6.9□□□□□ -1.3
LRRC39-204ENST00000620882 EPAS1Q99814 870 aa6.89□□□□□ -1.31
LRRC39-204ENST00000620882 ATP1B4Q9UN42 357 aaPredicted RBP6.89□□□□□ -1.31
LRRC39-204ENST00000620882 POTEJP0CG39 1038 aa6.88□□□□□ -1.31
LRRC39-204ENST00000620882 TBC1D2Q9BYX2 928 aa6.88□□□□□ -1.31
LRRC39-204ENST00000620882 PCDHGA4Q9Y5G9 962 aa6.88□□□□□ -1.31
LRRC39-204ENST00000620882 RFC5P40937 340 aa6.88□□□□□ -1.31
LRRC39-204ENST00000620882 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
LRRC39-204ENST00000620882 TYW1BQ6NUM6 668 aa6.88□□□□□ -1.31
LRRC39-204ENST00000620882 C3orf80F5H4A9 247 aa6.87□□□□□ -1.31
LRRC39-204ENST00000620882 NPM2Q86SE8 214 aaKnown RBP6.87□□□□□ -1.31
LRRC39-204ENST00000620882 KHSRPQ92945 711 aaKnown RBP eCLIP6.87□□□□□ -1.31
LRRC39-204ENST00000620882 FOSBP53539 338 aa6.86□□□□□ -1.31
LRRC39-204ENST00000620882 C6orf132Q5T0Z8 1188 aa6.86□□□□□ -1.31
LRRC39-204ENST00000620882 C3orf67Q6ZVT6 689 aa6.86□□□□□ -1.31
LRRC39-204ENST00000620882 TTC13Q8NBP0 860 aa6.86□□□□□ -1.31
LRRC39-204ENST00000620882 JPH4Q96JJ6 628 aa6.86□□□□□ -1.31
LRRC39-204ENST00000620882 FAM198AQ9UFP1 575 aa6.86□□□□□ -1.31
LRRC39-204ENST00000620882 MTMR14Q8NCE2 650 aa6.86□□□□□ -1.31
LRRC39-204ENST00000620882 SPDYE5A6NIY4 337 aa6.85□□□□□ -1.31
LRRC39-204ENST00000620882 ADAM33Q9BZ11 813 aa6.85□□□□□ -1.31
LRRC39-204ENST00000620882 GDPD2Q9HCC8 539 aa6.84□□□□□ -1.31
LRRC39-204ENST00000620882 METRNQ9UJH8 293 aa6.84□□□□□ -1.31
LRRC39-204ENST00000620882 OATP04181 439 aa6.84□□□□□ -1.32
LRRC39-204ENST00000620882 QPCTQ16769 361 aa6.84□□□□□ -1.32
LRRC39-204ENST00000620882 RAD21O60216 631 aa6.83□□□□□ -1.32
LRRC39-204ENST00000620882 POM121CA8CG34 1229 aa6.82□□□□□ -1.32
LRRC39-204ENST00000620882 ZNF454Q8N9F8 522 aa6.82□□□□□ -1.32
LRRC39-204ENST00000620882 RETREG2Q8NC44 543 aa6.82□□□□□ -1.32
LRRC39-204ENST00000620882 SPIRE2Q8WWL2 714 aa6.82□□□□□ -1.32
LRRC39-204ENST00000620882 FBXW7Q969H0 707 aa6.82□□□□□ -1.32
LRRC39-204ENST00000620882 RANGAP1P46060 587 aaPredicted RBP6.82□□□□□ -1.32
LRRC39-204ENST00000620882 CSPP1Q1MSJ5 1256 aa6.82□□□□□ -1.32
LRRC39-204ENST00000620882 CCDC97Q96F63 343 aaPredicted RBP6.82□□□□□ -1.32
LRRC39-204ENST00000620882 ZNF330Q9Y3S2 320 aaPredicted RBP6.82□□□□□ -1.32
LRRC39-204ENST00000620882 ZBTB7CA1YPR0 619 aa6.81□□□□□ -1.32
LRRC39-204ENST00000620882 NUDT7P0C024 238 aa6.81□□□□□ -1.32
LRRC39-204ENST00000620882 CDCA7LQ96GN5 454 aa6.81□□□□□ -1.32
LRRC39-204ENST00000620882 COL9A1P20849 921 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 SLC39A7Q92504 469 aa6.8□□□□□ -1.32
LRRC39-204ENST00000620882 ZDHHC16Q969W1 377 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms