RNA–Protein interactions for RNA: ENST00000620145.4

MIAT-221, myocardial infarction associated transcript, human

TSL 1 (best)

Gene MIAT, Length 10,069 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MIAT-221	ENST00000620145	NIN	Q8N4C6	2090 aa		10.85	□□□□□ -0.67
MIAT-221	ENST00000620145	RRP7A	Q9Y3A4	280 aa	Known RBP	10.85	□□□□□ -0.67
MIAT-221	ENST00000620145	CUX2	O14529	1486 aa		10.85	□□□□□ -0.67
MIAT-221	ENST00000620145	CCDC9	Q9Y3X0	531 aa	Known RBP	10.84	□□□□□ -0.67
MIAT-221	ENST00000620145	PAK3	O75914	559 aa	Predicted RBP	10.84	□□□□□ -0.67
MIAT-221	ENST00000620145	KAT6A	Q92794	2004 aa		10.84	□□□□□ -0.67
MIAT-221	ENST00000620145	NOC3L	Q8WTT2	800 aa	Known RBP	10.84	□□□□□ -0.67
MIAT-221	ENST00000620145	HSP90B1	P14625	803 aa	Known RBP	10.83	□□□□□ -0.68
MIAT-221	ENST00000620145	PDE4A	P27815	886 aa		10.83	□□□□□ -0.68
MIAT-221	ENST00000620145	MCC	P23508	829 aa		10.83	□□□□□ -0.68
MIAT-221	ENST00000620145	CALD1	Q05682	793 aa	Known RBP	10.83	□□□□□ -0.68
MIAT-221	ENST00000620145	RAB3GAP2	Q9H2M9	1393 aa		10.82	□□□□□ -0.68
MIAT-221	ENST00000620145	KANK1	Q14678	1352 aa		10.82	□□□□□ -0.68
MIAT-221	ENST00000620145	CFAP65	Q6ZU64	1925 aa	Known RBP	10.82	□□□□□ -0.68
MIAT-221	ENST00000620145	CECR2	Q9BXF3	1484 aa		10.81	□□□□□ -0.68
MIAT-221	ENST00000620145	CHMP3	Q9Y3E7	222 aa		10.81	□□□□□ -0.68
MIAT-221	ENST00000620145	PLIN1	O60240	522 aa		10.81	□□□□□ -0.68
MIAT-221	ENST00000620145	VPS8	Q8N3P4	1428 aa		10.81	□□□□□ -0.68
MIAT-221	ENST00000620145	GGT6	Q6P531	493 aa		10.8	□□□□□ -0.68
MIAT-221	ENST00000620145	ZBED9	Q6R2W3	1325 aa		10.8	□□□□□ -0.68
MIAT-221	ENST00000620145	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.8	□□□□□ -0.68
MIAT-221	ENST00000620145	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.8	□□□□□ -0.68
MIAT-221	ENST00000620145	HMGN5	P82970	282 aa	Known RBP	10.8	□□□□□ -0.68
MIAT-221	ENST00000620145	KIAA1211	Q6ZU35	1233 aa		10.8	□□□□□ -0.68
MIAT-221	ENST00000620145	KIF16B	Q96L93	1317 aa		10.8	□□□□□ -0.68
MIAT-221	ENST00000620145	CREBRF	Q8IUR6	639 aa		10.79	□□□□□ -0.68
MIAT-221	ENST00000620145	RTF1	Q92541	710 aa	Known RBP	10.79	□□□□□ -0.68
MIAT-221	ENST00000620145	TRIM6-TRIM34	B2RNG4	842 aa		10.79	□□□□□ -0.68
MIAT-221	ENST00000620145	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
MIAT-221	ENST00000620145	FAM161A	Q3B820	660 aa		10.79	□□□□□ -0.68
MIAT-221	ENST00000620145	CARMIL1	Q5VZK9	1371 aa		10.79	□□□□□ -0.68
MIAT-221	ENST00000620145	CSB-PGBD3	P0DP91	1061 aa		10.78	□□□□□ -0.68
MIAT-221	ENST00000620145	TAF7L	Q5H9L4	462 aa		10.78	□□□□□ -0.68
MIAT-221	ENST00000620145	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.78	□□□□□ -0.68
MIAT-221	ENST00000620145	TPM4	P67936	248 aa		10.78	□□□□□ -0.68
MIAT-221	ENST00000620145	SLC4A10	Q6U841	1118 aa		10.78	□□□□□ -0.68
MIAT-221	ENST00000620145	STK11IP	Q8N1F8	1099 aa		10.77	□□□□□ -0.68
MIAT-221	ENST00000620145	KNL1	Q8NG31	2342 aa		10.77	□□□□□ -0.68
MIAT-221	ENST00000620145	NUMA1	Q14980	2115 aa		10.77	□□□□□ -0.68
MIAT-221	ENST00000620145	BCL2L13	Q9BXK5	485 aa		10.77	□□□□□ -0.69
MIAT-221	ENST00000620145	SMC4	Q9NTJ3	1288 aa		10.77	□□□□□ -0.69
MIAT-221	ENST00000620145	NUTM2F	A1L443	756 aa		10.77	□□□□□ -0.69
MIAT-221	ENST00000620145	LTV1	Q96GA3	475 aa	Predicted RBP	10.77	□□□□□ -0.69
MIAT-221	ENST00000620145	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.77	□□□□□ -0.69
MIAT-221	ENST00000620145	NFKBIB	Q15653	356 aa		10.77	□□□□□ -0.69
MIAT-221	ENST00000620145	MRE11	P49959	708 aa		10.76	□□□□□ -0.69
MIAT-221	ENST00000620145	CCDC88B	A6NC98	1476 aa		10.76	□□□□□ -0.69
MIAT-221	ENST00000620145	PDE3B	Q13370	1112 aa		10.76	□□□□□ -0.69
MIAT-221	ENST00000620145	NUP155	O75694	1391 aa		10.76	□□□□□ -0.69
MIAT-221	ENST00000620145	RDX	P35241	583 aa	Known RBP	10.76	□□□□□ -0.69
MIAT-221	ENST00000620145	CCDC70	Q6NSX1	233 aa		10.76	□□□□□ -0.69
MIAT-221	ENST00000620145	RWDD1	Q9H446	243 aa	Predicted RBP	10.76	□□□□□ -0.69
MIAT-221	ENST00000620145	USP8	P40818	1118 aa		10.75	□□□□□ -0.69
MIAT-221	ENST00000620145	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.75	□□□□□ -0.69
MIAT-221	ENST00000620145	FHAD1	B1AJZ9	1412 aa		10.75	□□□□□ -0.69
MIAT-221	ENST00000620145	FHOD3	Q2V2M9	1422 aa		10.74	□□□□□ -0.69
MIAT-221	ENST00000620145	TRH	P20396	242 aa	Predicted RBP	10.74	□□□□□ -0.69
MIAT-221	ENST00000620145	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.74	□□□□□ -0.69
MIAT-221	ENST00000620145	PHLDB1	Q86UU1	1377 aa		10.73	□□□□□ -0.69
MIAT-221	ENST00000620145	ACBD3	Q9H3P7	528 aa		10.73	□□□□□ -0.69
MIAT-221	ENST00000620145	DEF6	Q9H4E7	631 aa		10.73	□□□□□ -0.69
MIAT-221	ENST00000620145	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.73	□□□□□ -0.69
MIAT-221	ENST00000620145	CCDC34	Q96HJ3	373 aa		10.73	□□□□□ -0.69
MIAT-221	ENST00000620145	SETD1B	Q9UPS6	1966 aa	Known RBP	10.73	□□□□□ -0.69
MIAT-221	ENST00000620145	NEFH	P12036	1026 aa		10.72	□□□□□ -0.69
MIAT-221	ENST00000620145	DIAPH3	Q9NSV4	1193 aa		10.72	□□□□□ -0.69
MIAT-221	ENST00000620145	CNTRL	Q7Z7A1	2325 aa		10.72	□□□□□ -0.69
MIAT-221	ENST00000620145	IPO8	O15397	1037 aa	Known RBP	10.72	□□□□□ -0.69
MIAT-221	ENST00000620145	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.72	□□□□□ -0.69
MIAT-221	ENST00000620145	TOMM22	Q9NS69	142 aa		10.72	□□□□□ -0.69
MIAT-221	ENST00000620145	MPHOSPH9	Q99550	1183 aa		10.72	□□□□□ -0.69
MIAT-221	ENST00000620145	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.72	□□□□□ -0.69
MIAT-221	ENST00000620145	RALBP1	Q15311	655 aa		10.71	□□□□□ -0.69
MIAT-221	ENST00000620145	EXOC6	Q8TAG9	804 aa		10.71	□□□□□ -0.7
MIAT-221	ENST00000620145	PES1	O00541	588 aa	Known RBP	10.7	□□□□□ -0.7
MIAT-221	ENST00000620145	GORAB	Q5T7V8	394 aa		10.7	□□□□□ -0.7
MIAT-221	ENST00000620145	CCDC191	Q8NCU4	936 aa		10.7	□□□□□ -0.7
MIAT-221	ENST00000620145	ELL2	O00472	640 aa	Predicted RBP	10.7	□□□□□ -0.7
MIAT-221	ENST00000620145	RASSF8	Q8NHQ8	419 aa		10.7	□□□□□ -0.7
MIAT-221	ENST00000620145	HMMR	O75330	724 aa		10.7	□□□□□ -0.7
MIAT-221	ENST00000620145	L3MBTL2	Q969R5	705 aa		10.7	□□□□□ -0.7
MIAT-221	ENST00000620145	ZMYND15	Q9H091	742 aa		10.7	□□□□□ -0.7
MIAT-221	ENST00000620145	STK31	Q9BXU1	1019 aa		10.69	□□□□□ -0.7
MIAT-221	ENST00000620145	FBXW7	Q969H0	707 aa		10.69	□□□□□ -0.7
MIAT-221	ENST00000620145	CCDC39	Q9UFE4	941 aa		10.69	□□□□□ -0.7
MIAT-221	ENST00000620145	FOSB	P53539	338 aa		10.69	□□□□□ -0.7
MIAT-221	ENST00000620145	DDX49	Q9Y6V7	483 aa	Known RBP	10.69	□□□□□ -0.7
MIAT-221	ENST00000620145	PMFBP1	Q8TBY8	1022 aa		10.69	□□□□□ -0.7
MIAT-221	ENST00000620145	AK7	Q96M32	723 aa		10.69	□□□□□ -0.7
MIAT-221	ENST00000620145	EIF3A	Q14152	1382 aa	Known RBP	10.69	□□□□□ -0.7
MIAT-221	ENST00000620145	VPS53	Q5VIR6	699 aa		10.68	□□□□□ -0.7
MIAT-221	ENST00000620145	ATP6V1D	Q9Y5K8	247 aa		10.68	□□□□□ -0.7
MIAT-221	ENST00000620145	HSP90B2P	Q58FF3	399 aa		10.68	□□□□□ -0.7
MIAT-221	ENST00000620145	NASP	P49321	788 aa	Predicted RBP	10.68	□□□□□ -0.7
MIAT-221	ENST00000620145	RRP12	Q5JTH9	1297 aa	Known RBP	10.68	□□□□□ -0.7
MIAT-221	ENST00000620145	DCTN1	Q14203	1278 aa		10.67	□□□□□ -0.7
MIAT-221	ENST00000620145	FBXO3	Q9UK99	471 aa		10.67	□□□□□ -0.7
MIAT-221	ENST00000620145	RRP1	P56182	461 aa	Known RBP	10.67	□□□□□ -0.7
MIAT-221	ENST00000620145	NECTIN2	Q92692	538 aa		10.67	□□□□□ -0.7
MIAT-221	ENST00000620145	MYH8	P13535	1937 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 1065.5 ms