RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ANAPC15P60006 121 aa9.5□□□□□ -0.89
TUBE1-207ENST00000604689 GPATCH11Q8N954 259 aa9.49□□□□□ -0.89
TUBE1-207ENST00000604689 TRIM66O15016 1216 aa9.49□□□□□ -0.89
TUBE1-207ENST00000604689 WIZO95785 1651 aa9.47□□□□□ -0.89
TUBE1-207ENST00000604689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.47□□□□□ -0.89
TUBE1-207ENST00000604689 MROH2BQ7Z745 1585 aa9.46□□□□□ -0.89
TUBE1-207ENST00000604689 FLIIQ13045 1269 aa9.45□□□□□ -0.9
TUBE1-207ENST00000604689 DMRT2Q9Y5R5 561 aa9.45□□□□□ -0.9
TUBE1-207ENST00000604689 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
TUBE1-207ENST00000604689 STAC3Q96MF2 364 aa9.44□□□□□ -0.9
TUBE1-207ENST00000604689 CFTRP13569 1480 aa9.43□□□□□ -0.9
TUBE1-207ENST00000604689 FOXD4L6Q3SYB3 417 aaPredicted RBP9.43□□□□□ -0.9
TUBE1-207ENST00000604689 FOXD4L3Q6VB84 417 aaPredicted RBP9.43□□□□□ -0.9
TUBE1-207ENST00000604689 PBRM1Q86U86 1689 aa9.42□□□□□ -0.9
TUBE1-207ENST00000604689 CCDC27Q2M243 656 aa9.42□□□□□ -0.9
TUBE1-207ENST00000604689 PROSER2Q86WR7 435 aaPredicted RBP9.42□□□□□ -0.9
TUBE1-207ENST00000604689 NEFMP07197 916 aa9.41□□□□□ -0.9
TUBE1-207ENST00000604689 HSP90AA1P07900 732 aaKnown RBP9.41□□□□□ -0.9
TUBE1-207ENST00000604689 E2F4Q16254 413 aa9.41□□□□□ -0.9
TUBE1-207ENST00000604689 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
TUBE1-207ENST00000604689 MCM6Q14566 821 aa9.41□□□□□ -0.9
TUBE1-207ENST00000604689 ARHGEF1Q92888 912 aaKnown RBP9.41□□□□□ -0.9
TUBE1-207ENST00000604689 ATP1B4Q9UN42 357 aaPredicted RBP9.41□□□□□ -0.9
TUBE1-207ENST00000604689 HDAC5Q9UQL6 1122 aa9.41□□□□□ -0.9
TUBE1-207ENST00000604689 RRP9O43818 475 aaKnown RBP9.39□□□□□ -0.91
TUBE1-207ENST00000604689 GPIHBP1Q8IV16 184 aa9.39□□□□□ -0.91
TUBE1-207ENST00000604689 HIRIP3Q9BW71 556 aaPredicted RBP9.39□□□□□ -0.91
TUBE1-207ENST00000604689 IRX3P78415 501 aaPredicted RBP9.39□□□□□ -0.91
TUBE1-207ENST00000604689 MPNDQ8N594 471 aa9.38□□□□□ -0.91
TUBE1-207ENST00000604689 A6NJR5 290 aa9.38□□□□□ -0.91
TUBE1-207ENST00000604689 RFX1P22670 979 aa9.38□□□□□ -0.91
TUBE1-207ENST00000604689 DCAF8Q5TAQ9 597 aa9.37□□□□□ -0.91
TUBE1-207ENST00000604689 CLGNO14967 610 aa9.37□□□□□ -0.91
TUBE1-207ENST00000604689 KAT6BQ8WYB5 2073 aa9.36□□□□□ -0.91
TUBE1-207ENST00000604689 CDCA8Q53HL2 280 aa9.36□□□□□ -0.91
TUBE1-207ENST00000604689 SERPINA10Q9UK55 444 aa9.36□□□□□ -0.91
TUBE1-207ENST00000604689 DNMBPQ6XZF7 1577 aa9.35□□□□□ -0.91
TUBE1-207ENST00000604689 TOP2BQ02880 1626 aa9.35□□□□□ -0.91
TUBE1-207ENST00000604689 RSF1Q96T23 1441 aaPredicted RBP9.34□□□□□ -0.91
TUBE1-207ENST00000604689 IVNS1ABPQ9Y6Y0 642 aa9.34□□□□□ -0.91
TUBE1-207ENST00000604689 DDX10Q13206 875 aaKnown RBP9.34□□□□□ -0.91
TUBE1-207ENST00000604689 DNTTIP2Q5QJE6 756 aaKnown RBP9.34□□□□□ -0.91
TUBE1-207ENST00000604689 CCDC125Q86Z20 511 aa9.34□□□□□ -0.91
TUBE1-207ENST00000604689 ZNF830Q96NB3 372 aaPredicted RBP9.33□□□□□ -0.92
TUBE1-207ENST00000604689 MCCP23508 829 aa9.32□□□□□ -0.92
TUBE1-207ENST00000604689 CEP162Q5TB80 1403 aa9.32□□□□□ -0.92
TUBE1-207ENST00000604689 DNAJC2Q99543 621 aaKnown RBP9.31□□□□□ -0.92
TUBE1-207ENST00000604689 CLASP1Q7Z460 1538 aa9.31□□□□□ -0.92
TUBE1-207ENST00000604689 VGFO15240 615 aaPredicted RBP9.31□□□□□ -0.92
TUBE1-207ENST00000604689 PARP9Q8IXQ6 854 aa9.31□□□□□ -0.92
TUBE1-207ENST00000604689 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
TUBE1-207ENST00000604689 FOSBP53539 338 aa9.31□□□□□ -0.92
TUBE1-207ENST00000604689 CC2D1BQ5T0F9 858 aaKnown RBP9.3□□□□□ -0.92
TUBE1-207ENST00000604689 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.29□□□□□ -0.92
TUBE1-207ENST00000604689 PAK3O75914 559 aaPredicted RBP9.29□□□□□ -0.92
TUBE1-207ENST00000604689 FNBP4Q8N3X1 1017 aaPredicted RBP9.29□□□□□ -0.92
TUBE1-207ENST00000604689 ANP32BQ92688 251 aaKnown RBP9.29□□□□□ -0.92
TUBE1-207ENST00000604689 PLEKHD1A6NEE1 506 aa9.29□□□□□ -0.92
TUBE1-207ENST00000604689 ARIH1Q9Y4X5 557 aaPredicted RBP9.29□□□□□ -0.92
TUBE1-207ENST00000604689 ZNF622Q969S3 477 aaKnown RBP eCLIP9.28□□□□□ -0.92
TUBE1-207ENST00000604689 KIAA1522Q9P206 1035 aaPredicted RBP9.28□□□□□ -0.92
TUBE1-207ENST00000604689 CHRM1P11229 460 aaPredicted RBP9.28□□□□□ -0.92
TUBE1-207ENST00000604689 GRIPAP1Q4V328 841 aa9.28□□□□□ -0.92
TUBE1-207ENST00000604689 STAG3Q9UJ98 1225 aa9.28□□□□□ -0.92
TUBE1-207ENST00000604689 PPP1R37O75864 691 aa9.27□□□□□ -0.92
TUBE1-207ENST00000604689 BRD1O95696 1058 aa9.27□□□□□ -0.93
TUBE1-207ENST00000604689 SETQ01105 290 aaPredicted RBP9.27□□□□□ -0.93
TUBE1-207ENST00000604689 NOL8Q76FK4 1167 aaKnown RBP9.27□□□□□ -0.93
TUBE1-207ENST00000604689 PABPN1Q86U42 306 aaKnown RBP eCLIP9.27□□□□□ -0.93
TUBE1-207ENST00000604689 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
TUBE1-207ENST00000604689 ABCC8Q09428 1581 aa9.27□□□□□ -0.93
TUBE1-207ENST00000604689 ZHX1Q9UKY1 873 aaPredicted RBP9.27□□□□□ -0.93
TUBE1-207ENST00000604689 TTLL12Q14166 644 aaPredicted RBP9.26□□□□□ -0.93
TUBE1-207ENST00000604689 PYGBP11216 843 aa9.26□□□□□ -0.93
TUBE1-207ENST00000604689 TNNT2P45379 298 aaPredicted RBP9.26□□□□□ -0.93
TUBE1-207ENST00000604689 ZNF662Q6ZS27 426 aa9.26□□□□□ -0.93
TUBE1-207ENST00000604689 ZNF330Q9Y3S2 320 aaPredicted RBP9.26□□□□□ -0.93
TUBE1-207ENST00000604689 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
TUBE1-207ENST00000604689 MRRFQ96E11 262 aaKnown RBP9.25□□□□□ -0.93
TUBE1-207ENST00000604689 LAS1LQ9Y4W2 734 aaKnown RBP9.25□□□□□ -0.93
TUBE1-207ENST00000604689 SKIV2LQ15477 1246 aaKnown RBP9.25□□□□□ -0.93
TUBE1-207ENST00000604689 ARMCX6Q7L4S7 300 aa9.24□□□□□ -0.93
TUBE1-207ENST00000604689 CUL7Q14999 1698 aa9.24□□□□□ -0.93
TUBE1-207ENST00000604689 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
TUBE1-207ENST00000604689 SENP3-EIF4A1A0A087X0R7 540 aa9.23□□□□□ -0.93
TUBE1-207ENST00000604689 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
TUBE1-207ENST00000604689 SOGA1O94964 1423 aa9.22□□□□□ -0.93
TUBE1-207ENST00000604689 SMYD5Q6GMV2 418 aa9.22□□□□□ -0.93
TUBE1-207ENST00000604689 PHF14O94880 888 aa9.22□□□□□ -0.93
TUBE1-207ENST00000604689 POLD1P28340 1107 aa9.22□□□□□ -0.93
TUBE1-207ENST00000604689 B4GALNT3Q6L9W6 998 aa9.21□□□□□ -0.93
TUBE1-207ENST00000604689 CCDC102AQ96A19 550 aa9.21□□□□□ -0.93
TUBE1-207ENST00000604689 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
TUBE1-207ENST00000604689 RGL3Q3MIN7 710 aa9.21□□□□□ -0.94
TUBE1-207ENST00000604689 SPINK5Q9NQ38 1064 aaPredicted RBP9.21□□□□□ -0.94
TUBE1-207ENST00000604689 FANCIQ9NVI1 1328 aa9.21□□□□□ -0.94
TUBE1-207ENST00000604689 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
TUBE1-207ENST00000604689 POM121CA8CG34 1229 aa9.2□□□□□ -0.94
TUBE1-207ENST00000604689 CALR3Q96L12 384 aaKnown RBP9.2□□□□□ -0.94
TUBE1-207ENST00000604689 RUSC2Q8N2Y8 1516 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms