RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 SEPT9Q9UHD8 586 aaPredicted RBP10.07□□□□□ -0.8
CTNS-210ENST00000576979 GFRA3O60609 400 aa10.06□□□□□ -0.8
CTNS-210ENST00000576979 KIAA1468Q9P260 1216 aa10.06□□□□□ -0.8
CTNS-210ENST00000576979 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
CTNS-210ENST00000576979 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
CTNS-210ENST00000576979 LAPTM4BQ86VI4 370 aa10.03□□□□□ -0.8
CTNS-210ENST00000576979 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
CTNS-210ENST00000576979 NYAP1Q6ZVC0 841 aa10.01□□□□□ -0.81
CTNS-210ENST00000576979 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
CTNS-210ENST00000576979 PDE4AP27815 886 aa10□□□□□ -0.81
CTNS-210ENST00000576979 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
CTNS-210ENST00000576979 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
CTNS-210ENST00000576979 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
CTNS-210ENST00000576979 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
CTNS-210ENST00000576979 TYW1BQ6NUM6 668 aa9.97□□□□□ -0.81
CTNS-210ENST00000576979 DDX27Q96GQ7 796 aaKnown RBP9.97□□□□□ -0.81
CTNS-210ENST00000576979 PRKD2Q9BZL6 878 aa9.96□□□□□ -0.82
CTNS-210ENST00000576979 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
CTNS-210ENST00000576979 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
CTNS-210ENST00000576979 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
CTNS-210ENST00000576979 PHF14O94880 888 aa9.94□□□□□ -0.82
CTNS-210ENST00000576979 FBXW7Q969H0 707 aa9.94□□□□□ -0.82
CTNS-210ENST00000576979 NRG2O14511 850 aaPredicted RBP9.93□□□□□ -0.82
CTNS-210ENST00000576979 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
CTNS-210ENST00000576979 LRCH3Q96II8 777 aa9.93□□□□□ -0.82
CTNS-210ENST00000576979 TRIM6-TRIM34B2RNG4 842 aa9.92□□□□□ -0.82
CTNS-210ENST00000576979 C6orf132Q5T0Z8 1188 aa9.92□□□□□ -0.82
CTNS-210ENST00000576979 DNAJC5Q9H3Z4 198 aa9.92□□□□□ -0.82
CTNS-210ENST00000576979 MFSD10Q14728 455 aa9.91□□□□□ -0.82
CTNS-210ENST00000576979 ONECUT3O60422 494 aaPredicted RBP9.9□□□□□ -0.82
CTNS-210ENST00000576979 TJAP1Q5JTD0 557 aa9.9□□□□□ -0.82
CTNS-210ENST00000576979 ZNF787Q6DD87 383 aa9.9□□□□□ -0.82
CTNS-210ENST00000576979 RBM33Q96EV2 1170 aaKnown RBP9.89□□□□□ -0.83
CTNS-210ENST00000576979 ZNF775Q96BV0 537 aaPredicted RBP9.88□□□□□ -0.83
CTNS-210ENST00000576979 PPP1R18Q6NYC8 613 aa9.87□□□□□ -0.83
CTNS-210ENST00000576979 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
CTNS-210ENST00000576979 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
CTNS-210ENST00000576979 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
CTNS-210ENST00000576979 PPP4CP60510 307 aa9.84□□□□□ -0.83
CTNS-210ENST00000576979 MTRQ99707 1265 aa9.84□□□□□ -0.83
CTNS-210ENST00000576979 ZNF516Q92618 1163 aa9.83□□□□□ -0.84
CTNS-210ENST00000576979 SMAPO00193 183 aa9.82□□□□□ -0.84
CTNS-210ENST00000576979 EPAS1Q99814 870 aa9.82□□□□□ -0.84
CTNS-210ENST00000576979 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
CTNS-210ENST00000576979 V9GY48 417 aaPredicted RBP9.82□□□□□ -0.84
CTNS-210ENST00000576979 ZCCHC6Q5VYS8 1495 aaKnown RBP9.81□□□□□ -0.84
CTNS-210ENST00000576979 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
CTNS-210ENST00000576979 CADPS2Q86UW7 1296 aa9.81□□□□□ -0.84
CTNS-210ENST00000576979 DDX12PQ92771 950 aa9.81□□□□□ -0.84
CTNS-210ENST00000576979 DPYSL4O14531 572 aa9.8□□□□□ -0.84
CTNS-210ENST00000576979 TSR1Q2NL82 804 aaKnown RBP9.8□□□□□ -0.84
CTNS-210ENST00000576979 C3orf80F5H4A9 247 aa9.79□□□□□ -0.84
CTNS-210ENST00000576979 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
CTNS-210ENST00000576979 IL21Q9HBE4 155 aa9.79□□□□□ -0.84
CTNS-210ENST00000576979 SHROOM4Q9ULL8 1493 aa9.79□□□□□ -0.84
CTNS-210ENST00000576979 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.78□□□□□ -0.84
CTNS-210ENST00000576979 PACS2Q86VP3 889 aa9.76□□□□□ -0.85
CTNS-210ENST00000576979 FAM198AQ9UFP1 575 aa9.76□□□□□ -0.85
CTNS-210ENST00000576979 APLP1P51693 650 aa9.73□□□□□ -0.85
CTNS-210ENST00000576979 POTECB2RU33 542 aa9.72□□□□□ -0.85
CTNS-210ENST00000576979 MAP3K7O43318 606 aa9.72□□□□□ -0.85
CTNS-210ENST00000576979 EN1Q05925 392 aaPredicted RBP9.72□□□□□ -0.85
CTNS-210ENST00000576979 CAMK2BQ13554 666 aa9.72□□□□□ -0.85
CTNS-210ENST00000576979 NBR1Q14596 966 aa9.72□□□□□ -0.85
CTNS-210ENST00000576979 RNF40O75150 1001 aa9.7□□□□□ -0.86
CTNS-210ENST00000576979 TRIM67Q6ZTA4 783 aa9.7□□□□□ -0.86
CTNS-210ENST00000576979 CDCA7LQ96GN5 454 aa9.7□□□□□ -0.86
CTNS-210ENST00000576979 PRIM1P49642 420 aaKnown RBP9.67□□□□□ -0.86
CTNS-210ENST00000576979 COPS2P61201 443 aa9.67□□□□□ -0.86
CTNS-210ENST00000576979 PRSS12P56730 875 aa9.66□□□□□ -0.86
CTNS-210ENST00000576979 TATDN2Q93075 761 aa9.66□□□□□ -0.86
CTNS-210ENST00000576979 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
CTNS-210ENST00000576979 PNMA3Q9UL41 463 aa9.66□□□□□ -0.86
CTNS-210ENST00000576979 MYT1Q01538 1121 aa9.65□□□□□ -0.86
CTNS-210ENST00000576979 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
CTNS-210ENST00000576979 SUPT5HO00267 1087 aaKnown RBP9.61□□□□□ -0.87
CTNS-210ENST00000576979 NUDT18Q6ZVK8 323 aa9.61□□□□□ -0.87
CTNS-210ENST00000576979 GGCXP38435 758 aa9.6□□□□□ -0.87
CTNS-210ENST00000576979 PKDCCQ504Y2 493 aa9.6□□□□□ -0.87
CTNS-210ENST00000576979 CDHR5Q9HBB8 845 aa9.59□□□□□ -0.87
CTNS-210ENST00000576979 SLC19A1P41440 591 aa9.58□□□□□ -0.88
CTNS-210ENST00000576979 PDIA6Q15084 440 aa9.58□□□□□ -0.88
CTNS-210ENST00000576979 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
CTNS-210ENST00000576979 ZPR1O75312 459 aa9.57□□□□□ -0.88
CTNS-210ENST00000576979 LCE2AQ5TA79 106 aaPredicted RBP9.57□□□□□ -0.88
CTNS-210ENST00000576979 TMUB1Q9BVT8 246 aa9.57□□□□□ -0.88
CTNS-210ENST00000576979 DCAF1Q9Y4B6 1507 aa9.56□□□□□ -0.88
CTNS-210ENST00000576979 SWT1Q5T5J6 900 aaKnown RBP9.56□□□□□ -0.88
CTNS-210ENST00000576979 DGAT1O75907 488 aa9.55□□□□□ -0.88
CTNS-210ENST00000576979 ST8SIA5O15466 376 aa9.54□□□□□ -0.88
CTNS-210ENST00000576979 SPRYD7Q5W111 196 aa9.54□□□□□ -0.88
CTNS-210ENST00000576979 TREML4Q6UXN2 200 aa9.54□□□□□ -0.88
CTNS-210ENST00000576979 FAM187AA6NFU0 413 aa9.53□□□□□ -0.88
CTNS-210ENST00000576979 TNFRSF10AO00220 468 aa9.53□□□□□ -0.88
CTNS-210ENST00000576979 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
CTNS-210ENST00000576979 TLL1O43897 1013 aa9.53□□□□□ -0.88
CTNS-210ENST00000576979 HDGFP51858 240 aaKnown RBP9.53□□□□□ -0.88
CTNS-210ENST00000576979 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
CTNS-210ENST00000576979 CERKQ8TCT0 537 aa9.52□□□□□ -0.89
CTNS-210ENST00000576979 PRR20EP86478 221 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms