RNA–Protein interactions for RNA: ENST00000560176.1

AC012409.1-201, humanhuman

TSL 3 BASIC

Gene AC012409.1, Length 358 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-201ENST00000560176 RNF25Q96BH1 459 aaPredicted RBP6.22□□□□□ -1.41
AC012409.1-201ENST00000560176 PLEKHG3A1L390 1219 aa6.21□□□□□ -1.42
AC012409.1-201ENST00000560176 FTSJ3Q8IY81 847 aaKnown RBP6.21□□□□□ -1.42
AC012409.1-201ENST00000560176 C8orf37Q96NL8 207 aa6.21□□□□□ -1.42
AC012409.1-201ENST00000560176 SPINK5Q9NQ38 1064 aaPredicted RBP6.21□□□□□ -1.42
AC012409.1-201ENST00000560176 PLSCR2Q9NRY7 297 aa6.21□□□□□ -1.42
AC012409.1-201ENST00000560176 TRIM66O15016 1216 aa6.2□□□□□ -1.42
AC012409.1-201ENST00000560176 ERCC3P19447 782 aa6.2□□□□□ -1.42
AC012409.1-201ENST00000560176 DEKP35659 375 aaKnown RBP6.2□□□□□ -1.42
AC012409.1-201ENST00000560176 MCM6Q14566 821 aa6.2□□□□□ -1.42
AC012409.1-201ENST00000560176 HMGB1P1B2RPK0 211 aaPredicted RBP6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 RAB11FIP3O75154 756 aa6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 TCF3P15923 654 aa6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 ZNF662Q6ZS27 426 aa6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 MORC4Q8TE76 937 aa6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 TRIM41Q8WV44 630 aa6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 UBXN4Q92575 508 aa6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 MRRFQ96E11 262 aaKnown RBP6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 UBA5Q9GZZ9 404 aa6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 ACIN1Q9UKV3 1341 aaKnown RBP6.19□□□□□ -1.42
AC012409.1-201ENST00000560176 PHF14O94880 888 aa6.18□□□□□ -1.42
AC012409.1-201ENST00000560176 RBM26Q5T8P6 1007 aaKnown RBP6.18□□□□□ -1.42
AC012409.1-201ENST00000560176 GIMAP6Q6P9H5 292 aa6.18□□□□□ -1.42
AC012409.1-201ENST00000560176 CADPS2Q86UW7 1296 aa6.18□□□□□ -1.42
AC012409.1-201ENST00000560176 KRI1Q8N9T8 703 aaKnown RBP6.18□□□□□ -1.42
AC012409.1-201ENST00000560176 SALL2Q9Y467 1007 aaPredicted RBP6.18□□□□□ -1.42
AC012409.1-201ENST00000560176 PEG3Q9GZU2 1588 aa6.18□□□□□ -1.42
AC012409.1-201ENST00000560176 SMARCA4P51532 1647 aa6.17□□□□□ -1.42
AC012409.1-201ENST00000560176 FAM193AP78312 1265 aa6.17□□□□□ -1.42
AC012409.1-201ENST00000560176 IVNS1ABPQ9Y6Y0 642 aa6.17□□□□□ -1.42
AC012409.1-201ENST00000560176 BAZ1AQ9NRL2 1556 aaPredicted RBP6.16□□□□□ -1.42
AC012409.1-201ENST00000560176 MKRN4PQ13434 485 aaPredicted RBP6.16□□□□□ -1.42
AC012409.1-201ENST00000560176 POM121Q96HA1 1249 aa6.16□□□□□ -1.42
AC012409.1-201ENST00000560176 DDRGK1Q96HY6 314 aa6.16□□□□□ -1.42
AC012409.1-201ENST00000560176 RYDENQ9NUL5 291 aaKnown RBP6.16□□□□□ -1.42
AC012409.1-201ENST00000560176 PPFIA4O75335 1185 aa6.15□□□□□ -1.42
AC012409.1-201ENST00000560176 PEX14O75381 377 aa6.15□□□□□ -1.42
AC012409.1-201ENST00000560176 FOSBP53539 338 aa6.15□□□□□ -1.42
AC012409.1-201ENST00000560176 LONRF3Q496Y0 759 aa6.15□□□□□ -1.42
AC012409.1-201ENST00000560176 RTL5Q5HYW3 569 aaPredicted RBP6.15□□□□□ -1.42
AC012409.1-201ENST00000560176 CCDC181Q5TID7 509 aa6.15□□□□□ -1.42
AC012409.1-201ENST00000560176 SMC5Q8IY18 1101 aa6.15□□□□□ -1.42
AC012409.1-201ENST00000560176 EVI5LQ96CN4 794 aa6.15□□□□□ -1.42
AC012409.1-201ENST00000560176 WIZO95785 1651 aa6.14□□□□□ -1.43
AC012409.1-201ENST00000560176 MAP4K4O95819 1239 aaPredicted RBP6.14□□□□□ -1.43
AC012409.1-201ENST00000560176 MTA3Q9BTC8 594 aa6.14□□□□□ -1.43
AC012409.1-201ENST00000560176 MAGEC2Q9UBF1 373 aaPredicted RBP6.14□□□□□ -1.43
AC012409.1-201ENST00000560176 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
AC012409.1-201ENST00000560176 MYBPC2Q14324 1141 aa6.13□□□□□ -1.43
AC012409.1-201ENST00000560176 SMYD5Q6GMV2 418 aa6.13□□□□□ -1.43
AC012409.1-201ENST00000560176 TSHZ1Q6ZSZ6 1077 aa6.13□□□□□ -1.43
AC012409.1-201ENST00000560176 TXNDC2Q86VQ3 553 aa6.13□□□□□ -1.43
AC012409.1-201ENST00000560176 GOPCQ9HD26 462 aa6.13□□□□□ -1.43
AC012409.1-201ENST00000560176 STK25O00506 426 aa6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 FOXD4Q12950 439 aaPredicted RBP6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 KRBA2Q6ZNG9 492 aa6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 RINLQ6ZS11 566 aa6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 CDCA7Q9BWT1 371 aaPredicted RBP6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 METTL14Q9HCE5 456 aaKnown RBP6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 ATAD2BQ9ULI0 1458 aa6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 USTQ9Y2C2 406 aa6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 RPS6KL1Q9Y6S9 549 aa6.12□□□□□ -1.43
AC012409.1-201ENST00000560176 EIF4G1Q04637 1599 aaKnown RBP6.11□□□□□ -1.43
AC012409.1-201ENST00000560176 CREB3O43889 395 aa6.11□□□□□ -1.43
AC012409.1-201ENST00000560176 ZC3H6P61129 1189 aaKnown RBP6.11□□□□□ -1.43
AC012409.1-201ENST00000560176 SKIV2LQ15477 1246 aaKnown RBP6.11□□□□□ -1.43
AC012409.1-201ENST00000560176 PLCD3Q8N3E9 789 aa6.11□□□□□ -1.43
AC012409.1-201ENST00000560176 RBM46Q8TBY0 533 aaKnown RBP6.11□□□□□ -1.43
AC012409.1-201ENST00000560176 CHMP4BQ9H444 224 aaKnown RBP6.11□□□□□ -1.43
AC012409.1-201ENST00000560176 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
AC012409.1-201ENST00000560176 CLGNO14967 610 aa6.1□□□□□ -1.43
AC012409.1-201ENST00000560176 ARID4AP29374 1257 aaPredicted RBP6.1□□□□□ -1.43
AC012409.1-201ENST00000560176 SF3A1Q15459 793 aaKnown RBP6.1□□□□□ -1.43
AC012409.1-201ENST00000560176 ZFYVE27Q5T4F4 411 aa6.1□□□□□ -1.43
AC012409.1-201ENST00000560176 ZNF622Q969S3 477 aaKnown RBP eCLIP6.1□□□□□ -1.43
AC012409.1-201ENST00000560176 ZNF219Q9P2Y4 722 aaPredicted RBP6.1□□□□□ -1.43
AC012409.1-201ENST00000560176 NCAPD3P42695 1498 aa6.09□□□□□ -1.43
AC012409.1-201ENST00000560176 CCER2I3L3R5 266 aa6.09□□□□□ -1.43
AC012409.1-201ENST00000560176 EIF3JO75822 258 aaKnown RBP6.09□□□□□ -1.43
AC012409.1-201ENST00000560176 CLEC4GQ6UXB4 293 aa6.09□□□□□ -1.43
AC012409.1-201ENST00000560176 GPATCH3Q96I76 525 aa6.09□□□□□ -1.43
AC012409.1-201ENST00000560176 CCDC194A0A1B0GVG4 234 aa6.08□□□□□ -1.44
AC012409.1-201ENST00000560176 SH3BP5O60239 455 aa6.08□□□□□ -1.44
AC012409.1-201ENST00000560176 DPH6Q7L8W6 267 aa6.08□□□□□ -1.44
AC012409.1-201ENST00000560176 SDR16C5Q8N3Y7 309 aa6.08□□□□□ -1.44
AC012409.1-201ENST00000560176 VTI1AQ96AJ9 217 aa6.08□□□□□ -1.44
AC012409.1-201ENST00000560176 SBNO2Q9Y2G9 1366 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 EXOC5O00471 708 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 PARNO95453 639 aaKnown RBP6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 ZNF16P17020 682 aaPredicted RBP6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 APLP1P51693 650 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 NAALADL2Q58DX5 795 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 WDR78Q5VTH9 848 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 GPIHBP1Q8IV16 184 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 PMM1Q92871 262 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 MAF1Q9H063 256 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 PNMA2Q9UL42 364 aa6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 TOP2AP11388 1531 aaKnown RBP6.07□□□□□ -1.44
AC012409.1-201ENST00000560176 LIG1P18858 919 aa6.06□□□□□ -1.44
AC012409.1-201ENST00000560176 PAX3P23760 479 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms