RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 CEP164Q9UPV0 1460 aa11.57□□□□□ -0.56
ZEB1-211ENST00000558440 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
ZEB1-211ENST00000558440 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
ZEB1-211ENST00000558440 EVI5O60447 810 aa11.56□□□□□ -0.56
ZEB1-211ENST00000558440 MAP3K9P80192 1104 aa11.56□□□□□ -0.56
ZEB1-211ENST00000558440 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
ZEB1-211ENST00000558440 ARHGAP33O14559 1287 aa11.55□□□□□ -0.56
ZEB1-211ENST00000558440 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
ZEB1-211ENST00000558440 FOSBP53539 338 aa11.52□□□□□ -0.57
ZEB1-211ENST00000558440 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
ZEB1-211ENST00000558440 JPH4Q96JJ6 628 aa11.51□□□□□ -0.57
ZEB1-211ENST00000558440 PSEN2P49810 448 aa11.49□□□□□ -0.57
ZEB1-211ENST00000558440 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
ZEB1-211ENST00000558440 CFTRP13569 1480 aa11.47□□□□□ -0.57
ZEB1-211ENST00000558440 DPYSL4O14531 572 aa11.47□□□□□ -0.57
ZEB1-211ENST00000558440 DMRTA1Q5VZB9 504 aa11.47□□□□□ -0.57
ZEB1-211ENST00000558440 BCL2L12Q9HB09 334 aa11.46□□□□□ -0.57
ZEB1-211ENST00000558440 ADGRD1Q6QNK2 874 aa11.45□□□□□ -0.58
ZEB1-211ENST00000558440 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
ZEB1-211ENST00000558440 TK2O00142 265 aa11.44□□□□□ -0.58
ZEB1-211ENST00000558440 KCNH8Q96L42 1107 aa11.44□□□□□ -0.58
ZEB1-211ENST00000558440 URB2Q14146 1524 aaKnown RBP11.44□□□□□ -0.58
ZEB1-211ENST00000558440 ZDHHC16Q969W1 377 aa11.43□□□□□ -0.58
ZEB1-211ENST00000558440 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
ZEB1-211ENST00000558440 E2F4Q16254 413 aa11.42□□□□□ -0.58
ZEB1-211ENST00000558440 WDR70Q9NW82 654 aa11.42□□□□□ -0.58
ZEB1-211ENST00000558440 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
ZEB1-211ENST00000558440 PCDHGA10Q9Y5H3 936 aa11.42□□□□□ -0.58
ZEB1-211ENST00000558440 ADAM33Q9BZ11 813 aa11.41□□□□□ -0.58
ZEB1-211ENST00000558440 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
ZEB1-211ENST00000558440 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
ZEB1-211ENST00000558440 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
ZEB1-211ENST00000558440 PHF14O94880 888 aa11.4□□□□□ -0.58
ZEB1-211ENST00000558440 PTPREP23469 700 aa11.4□□□□□ -0.58
ZEB1-211ENST00000558440 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
ZEB1-211ENST00000558440 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
ZEB1-211ENST00000558440 RSF1Q96T23 1441 aaPredicted RBP11.38□□□□□ -0.59
ZEB1-211ENST00000558440 HRO43593 1189 aa11.38□□□□□ -0.59
ZEB1-211ENST00000558440 PDIA6Q15084 440 aa11.37□□□□□ -0.59
ZEB1-211ENST00000558440 TYW1BQ6NUM6 668 aa11.37□□□□□ -0.59
ZEB1-211ENST00000558440 SLC4A5Q9BY07 1137 aa11.37□□□□□ -0.59
ZEB1-211ENST00000558440 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
ZEB1-211ENST00000558440 FBXW7Q969H0 707 aa11.36□□□□□ -0.59
ZEB1-211ENST00000558440 VPS9D1Q9Y2B5 631 aa11.35□□□□□ -0.59
ZEB1-211ENST00000558440 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
ZEB1-211ENST00000558440 SPDYE16A6NNV3 312 aaPredicted RBP11.34□□□□□ -0.59
ZEB1-211ENST00000558440 EPAS1Q99814 870 aa11.34□□□□□ -0.59
ZEB1-211ENST00000558440 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
ZEB1-211ENST00000558440 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
ZEB1-211ENST00000558440 ZNF608Q9ULD9 1512 aaPredicted RBP11.32□□□□□ -0.6
ZEB1-211ENST00000558440 DDX12PQ92771 950 aa11.32□□□□□ -0.6
ZEB1-211ENST00000558440 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
ZEB1-211ENST00000558440 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
ZEB1-211ENST00000558440 CHD1O14646 1710 aa11.29□□□□□ -0.6
ZEB1-211ENST00000558440 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
ZEB1-211ENST00000558440 TOPBP1Q92547 1522 aa11.29□□□□□ -0.6
ZEB1-211ENST00000558440 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
ZEB1-211ENST00000558440 CCDC88BA6NC98 1476 aa11.27□□□□□ -0.6
ZEB1-211ENST00000558440 COL9A1P20849 921 aa11.27□□□□□ -0.61
ZEB1-211ENST00000558440 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
ZEB1-211ENST00000558440 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
ZEB1-211ENST00000558440 BHMG1C9JSJ3 638 aaPredicted RBP11.26□□□□□ -0.61
ZEB1-211ENST00000558440 NBR1Q14596 966 aa11.26□□□□□ -0.61
ZEB1-211ENST00000558440 C6orf132Q5T0Z8 1188 aa11.26□□□□□ -0.61
ZEB1-211ENST00000558440 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
ZEB1-211ENST00000558440 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
ZEB1-211ENST00000558440 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
ZEB1-211ENST00000558440 PROX2Q3B8N5 592 aa11.22□□□□□ -0.61
ZEB1-211ENST00000558440 CYB5RLQ6IPT4 315 aa11.22□□□□□ -0.61
ZEB1-211ENST00000558440 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.61
ZEB1-211ENST00000558440 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
ZEB1-211ENST00000558440 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.61
ZEB1-211ENST00000558440 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
ZEB1-211ENST00000558440 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.61
ZEB1-211ENST00000558440 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
ZEB1-211ENST00000558440 MAP3K7O43318 606 aa11.2□□□□□ -0.62
ZEB1-211ENST00000558440 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
ZEB1-211ENST00000558440 AQRO60306 1485 aaKnown RBP eCLIP11.19□□□□□ -0.62
ZEB1-211ENST00000558440 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
ZEB1-211ENST00000558440 ONECUT3O60422 494 aaPredicted RBP11.18□□□□□ -0.62
ZEB1-211ENST00000558440 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
ZEB1-211ENST00000558440 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
ZEB1-211ENST00000558440 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
ZEB1-211ENST00000558440 GOLGA8CPA6NN73 597 aa11.15□□□□□ -0.62
ZEB1-211ENST00000558440 TRIM6-TRIM34B2RNG4 842 aa11.15□□□□□ -0.62
ZEB1-211ENST00000558440 OSBPP22059 807 aa11.15□□□□□ -0.62
ZEB1-211ENST00000558440 KIAA1468Q9P260 1216 aa11.15□□□□□ -0.62
ZEB1-211ENST00000558440 P3H3Q8IVL6 736 aa11.14□□□□□ -0.63
ZEB1-211ENST00000558440 WNT2BQ93097 391 aa11.13□□□□□ -0.63
ZEB1-211ENST00000558440 THSD4Q6ZMP0 1018 aa11.12□□□□□ -0.63
ZEB1-211ENST00000558440 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
ZEB1-211ENST00000558440 WDR97A6NE52 1622 aa11.12□□□□□ -0.63
ZEB1-211ENST00000558440 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
ZEB1-211ENST00000558440 RAD54L2Q9Y4B4 1467 aa11.11□□□□□ -0.63
ZEB1-211ENST00000558440 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
ZEB1-211ENST00000558440 SOGA1O94964 1423 aa11.09□□□□□ -0.63
ZEB1-211ENST00000558440 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
ZEB1-211ENST00000558440 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
ZEB1-211ENST00000558440 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
ZEB1-211ENST00000558440 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms